Table 2 Genome sequencing and contig assembly statistics
Parameters | HK97 | HK07 | BJ02 | BJ07 |
|---|---|---|---|---|
Total no. of reads | 14273328 | 21087930 | 12905538 | 14503760 |
No. of assembled reads | 13807870 | 20384885 | 12631772 | 14335583 |
No. of contigs | 125 | 81 | 89 | 81 |
Total no. of bases | 1284599520 | 1897913700 | 1161498420 | 1305338400 |
Average contig size (bases) | 24068 | 37011 | 32465 | 35090 |
N50 contig size (bases) | 53452 | 109354 | 79782 | 79076 |
Largest contig size (bases) | 167992 | 206466 | 310965 | 258620 |
Coverage depth | 424 | 629 | 400 | 457 |