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Table 5 dN/dS ratios for the various OR gene pairs identified in 14 families

From: Inventory of the cichlid olfactory receptor gene repertoires: identification of olfactory genes with more than one coding exon

Panel a

Family names

Number of sub-families

Number of genes

Means

Min.

Max.

Fam A

6

100

0.40±0.09

0.00

>10

Fam D

1

32

0.44±0.10

0.15

1.30

Fam E

2

56

0.40±0.11

0.10

2.27

Fam G

1

5

0.28±0.10

0.18

0.41

Fam H

4

50

0.41±0.14

0.00

1.14

Fam I

1

6

0.43±0.29

0.00

>10

Fam K

4

22

0.29±0.18

0.12

>10

Fam L

2

36

0.50±0.12

0.04

1.20

Fam N

5

37

0.39±0.14

0.18

1.79

Fam O

3

14

0.44±0.10

0.12

0.83

Fam P

3

15

0.37±0.10

0.07

0.86

Fam R

4

20

0.43±0.08

0.19

0.88

Fam S

2

26

0.39±0.09

0.14

1.19

Fam W

5

24

0.32±0.13

0.00

1.48

Panel b

Family names

A

D

E

G

H

I

K

L

N

O

P

R

S

W

dN/dS

11

1

4

0

9

2

2

4

5

5

0

0

1

2

dN/dS

2

0

0

0

5

0

2

0

0

0

0

0

0

0

Panel c

Family D

bri/bri

0.436

bri/cich

0.446

bur/bur

0.385

bur/cich

0.411

zeb/zeb

0.439

zeb/cich

0.432

nye/nye

0.422

nye/cich

0.447

til/til

0.451

til/cich

0.432

Family E

bri/bri

0.380

bri/cich

0.374

bur/bur

4.414

bur/cich

0.408

zeb/zeb

0.378

zeb/cich

0.382

nye/nye

0.440

nye/cich

0.416

til/til

0.396

til/cich

0.382

Family H

bri/bri

0.399

bri/cich

0.407

bur/bur

0.448

bur/cich

0.367

zeb/zeb

0.407

zeb/cich

0.399

nye/nye

0.431

nye/cich

0.398

til/til

0.414

til/cich

0.399

Family L

bur/bur

0.503

bur/cich

0.527

bri/bri

0.507

bri/cich

0.523

til/til

0.494

til/cich

0.480

zeb/zeb

0.490

zeb/cich

0.478

nye/nye

0.464

nye/cich

0.496

Family N

bur/bur

0.328

bur/cich

0.363

bri/bri

0.359

bri/cich

0.375

til/til

0.425

til/cich

0.401

zeb/zeb

0.446

zeb/cich

0.426

nye/nye

0.360

nye/cich

0.426

  1. dN/dS ratios were calculated for each pair of OR genes identified in the 14 families with 4 or more genes (panel a). The numbers of OR pairs per family with a dN/dS ratio above 1 are indicated in panel b. For those in which dS was 0, the dN/dS was arbitrarily given the value >10. In panel c, dN/dS ratios of pairs of paralogous genes (columns 2 and 6) were compared with the ratios of pairs of orthologous genes (columns 4 and 8).