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Table 4 List of down-regulated genes observed for the T0R_T0S interaction with respective annotation and fold-change values

From: Large-scale analysis of differential gene expression in coffee genotypes resistant and susceptible to leaf miner–toward the identification of candidate genes for marker assisted-selection

Name

Blast Sol network genomics

e-value

Annotation*

Fold change (T0R X T0S)

0D1

SGN-E1320843

0

Protein

-445,87

0D2

SGN-E676870

0

Protein

-235,45

0D3

SGN-E1320843

0

Zinc finger

-126,65

0D4

SGN-E1325444

0

Hypothetical protein VITISV_000181 [Vitis vinifera]

-62,54

0D5

SGN-E835732

0

Tapetum-specific protein lla-115

-49,63

0D6

SGN-E661762

0

---NA---

-35,43

0D7

NM**

 

PREDICTED: hypothetical protein [Vitis vinifera]

-24,73

0D8

NM

 

Glycerol-3-phosphate acyltransferase 6

-17,93

0D9

SGN-E1321887

0

gdsl-motif lipase hydrolase-like

-16,98

0D10

SGN-E1033676

5e-19

er glycerol-phosphate acyltransferase

-16,50

0D11

SGN-E1322050

0

Extensin-like protein

-14,88

0D12

SGN-E791894

1e-118

Cytochrome p450

-12,96

0D13

SGN-E837009

0

Cytochrome p450

-11,39

0D14

NM

 

Cytochrome b

-11,12

0D15

SGN-E1349845

1e-137

gdsl-motif lipase hydrolase family protein

-10,27

0D16

SGN-E1318049

1e-153

Gibberellin-regulated protein 1

-9,89

0D17

SGN-E660879

0

Zinc finger

-9,88

0D18

SGN-E835266

0

Isocitrate lyase

-9,22

0D19

SGN-E673783

0

Isocitrate lyase

-8,84

0D20

NM

 

---NA---

-8,83

0D21

SGN-E660879

0

Zinc finger

-8,73

0D22

SGN-E680272

1e-128

Protein

-8,498

0D23

SGN-E898278

4e-13

Protein

-8,43

0D24

SGN-E1328871

0

---NA---

-8,16

0D25

NM

 

Cytochrome p450

-8,02

0D26

SGN-E678498

0

Protein

-7,36

0D27

SGN-E1319644

0

Serine-threonine protein plant-

-7,35

0D28

SGN-E838812

1e-40

---NA---

-7,34

0D29

NM

 

Pathogenesis-related protein 1

-7,27

0D30

SGN-E1312882

0

Heat shock protein

-7,17

0D31

NM

 

---NA---

-7,12

0D32

SGN-E830806

0

Cytochrome p450

-7,06

0D33

SGN-E1334002

0

abc transporter

-7,00

0D34

SGN-E659349

0

Glutathione s-transferase gstu6

-6,85

0D35

SGN-E1317104

0

Aspartyl protease family protein

-6,74

0D36

SGN-E1322588

1e-180

at1g72120 f28p5_2

-6,53

0D37

NM

 

---NA---

-6,46

0D38

SGN-E1350292

0

Lactoylglutathione lyase family protein

-6,46

0D39

NM

 

Achain crystal structure of a cell-wall invertase from Arabidopsis thaliana in complex with sucrose

-6,36

0D40

SGN-E1335955

3e-56

Retroelement pol polyprotein

-6,24

0D41

SGN-E820310

2e-64

Xyloglucan endotransglucosylase hydrolase protein 22

-6,23

0D42

SGN-E836814

1e-169

Leucine-rich plant specific

-6,20

0D43

SGN-E686810

0

Zinc finger

-6,09

0D44

SGN-E839045

0

Glucose-methanol-choline oxidoreductase family protein

-6,06

0D45

SGN-E531670

1e-12

Hydrolyzing o-glycosyl

-5,97

0D46

SGN-E1216540

2e-27

Aminotransferase family protein

-5,91

0D47

SGN-E747084

4e-68

Alkaline alpha-galactosidase seed imbibition protein

-5,81

0D48

SGN-E836814

1e-179

Leucine-rich plant specific

-5,71

0D49

SGN-E1345225

0

---NA---

-5,71

0D50

SGN-E1325272

0

Protein

-5,69

0D51

SGN-E626178

8e-17

 

-5,62

0D52

NM

 

Alkaline alpha-galactosidase seed imbibition protein

-5,60

0D53

NM

 

Cinnamoyl reductase-like protein

-5,57

0D54

SGN-E1349228

0

Proline dehydrogenase

-5,54

0D55

SGN-E775239

8e-14

Kinesin like protein

-5,46

0D56

NM

 

Methyl-accepting chemotaxis sensory transducer

-5,45

0D57

NM

 

Transcription factor

-5,42

0D58

NM

 

3-hydroxyisobutyrate dehydrogenase family protein

-5,39

0D59

NM

 

Outer membrane porin protein

-5,36

0D60

SGN-E1317853

0

Transcription activator

-5,31

0D61

SGN-E666413

0

bahd family clade v

-5,20

0D62

SGN-E658983

0

Glycerol-3-phosphate dehydrogenase

-5,18

0D63

SGN-E1327315

0

Tonoplast intrinsic

-5,17

0D64

SGN-1331462

0

Achain crystal structure of a cell-wall invertase from arabidopsis thaliana in complex with sucrose

-5,08

0D65

NM

 

Inner-membrane translocator

-5,00

0D66

NM

 

Beta-ig-h3 fasciclin

-4,94

0D67

SGN-E653486

1e-52

bahd family clade v

-4,90

0D68

NM

 

Stachyose synthase

-4,86

0D69

SGN-E1349101

3e-46

60s acidic ribosomal protein p1

-4,85

0D70

NM

 

Disease resistance

-4,79

0D71

SGN-E666413

0

bahd family clade v

-4,75

0D72

SGN-E1313854

0

Cytosolic aldehyde dehydrogenase

-4,75

0D73

SGN-E1320568

0

Protein

-4,72

0D74

SGN-E748200

1e-22

Anthranilate synthase alpha subunit

-4,71

0D75

SGN-E1316428

0

Heat shock protein

-4,68

0D76

NM

 

Protein

-4,67

0D77

SGN-E700960

8e-56

Magnesium transporter

-4,67

0D78

SGN-E1321133

0

Glutathione s-transferase

-4,66

0D79

SGN-E1309644

1e-33

---NA---

-4,66

0D80

NM

 

nac domain ipr003441

-4,63

0D81

SGN-E791702

0

Zinc finger

-4,57

0D82

SGN-E524668

0

Protein

-4,49

0D83

SGN-E667829

0

gdsl-motif lipase hydrolase family protein

-4,46

0D84

SGN-E955597

4e-15

Proline dehydrogenase

-4,44

0D85

NM

 

---NA---

-4,43

0D86

SGN-E1312314

0

PREDICTED: hypothetical protein [Vitis vinifera]

-4,39

0D87

NM

 

Undecaprenyl pyrophosphate phosphatase

-4,37

0D88

SGN-E1350610

0

Cytosolic class i small heat-shock protein

-4,35

0D89

NM

 

---NA---

-4,34

0D90

SGN-E747084

2e-89

Alkaline alpha-galactosidase seed imbibition protein

-4,34

0D91

NM

 

Protein

-4,32

0D92

SGN-E528554

 

pili assembly chaperone

-4,31

0D93

SGN-E528554

7e-30

Cell-wall invertase

-4,28

0D94

NM

 

nbs-lrr resistance protein

-4,26

0D95

NM

 

Transcriptional family

-4,26

0D96

NM

 

---NA---

-4,24

0D97

NM

 

Oxysterol binding protein

-4,21

0D98

SGN-E1196563

2e-53

ap2 domain-containing transcription factor

-4,20

0D99

SGN-E834183

0

nac domain protein nac2

-4,19

0D100

SGN-E678677

0

---NA---

-4,19

  1. *The annotation of each sequence was established on the Coffee Genome Database (Vieira et al., 2006).
  2. **No match with any sequence on the Solanacea Genomic Database.