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Table 3 Nucleotide variation(s) within the coding genes of the electron transport complexes

From: Accelerated evolution of the mitochondrial genome in an alloplasmic line of durum wheat

 

Gene

T. turgidum

Ae. longissima

(lo) durum

Amino acid change

Complex I

nad3-1*

+

−

−

−

 

nad3-2

−

T/C185

T/C185

L/P

Complex IV

cox3-1

+

−

−

−

 

cox3-2

−

A/C157, GA/TC687

−

I/L, QM/HL

 

cox3-3

−

−

A/C157

I/L

Complex V

atp1-1

+

−

−

−

 

atp1-2

−

A/T1431

A/T1431

No change

 

atp8-I-1*

+

−

−

−

 

atp8-I-2

−

C/A239

−

 
 

atp8-I-3

−

−

C/T39, A/G149, G/A166

 
 

atp8-II-1*

+

−

−

−

 

atp8-II-2

−

C/A239, G/A463, T/C467

−

 
 

atp8-II-3

−

−

G/A462, T/C467

 

Other proteins

mttB-1

+

+

−

−

 

mttB-2

−

−

T/G 41

L/W

Variations &

 

0

4

3

 
  1. Arabic numbers indicate the SNP position relative to the start codon.
  2. +/− Indicates the presence/absence of gene allele in a particular genome.
  3. *Gene with multiple alleles. Reported here are only the most abundant alleles.
  4. &Summary of nucleotide variation observe only in genes with one know allele of that gene within species.
  5. Listed are the nucleotide changes found in the (lo) durum, and the Ae. longissima with the T. turgidum as the reference sequence. The SNP’s characteristic for each line are bold.