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Table 1 Summary of ESTs and contigs

From: The Babesia bovis gene and promoter model: an update from full-length EST analysis

 

Number

Accession number

Total number of isolated clones

12286

 

5' one-pass sequence

9573

DDBJ: HX874250-HX894778

3' one-pass sequence

10956

Contig sequence

6787

 

Non-redundant contig sequence1)

2115

DDBJ: AK440354-AK442468

Identical2)

310

 

Amino acid variant3)

342

Structural variant4)

1054

Assigned in this study5)

409

  1. 1) Nonredundant contig sequences were selected from the contig sequence. Identical, amino acid, structural, and assigned variants were subsets of nonredundant contig sequences. 2) Contig sequences with identical coding sequences to the preproposed gene model (ppgm); 3) Contig sequences with almost identical coding sequence but amino acid variant(s) derived from single nucleotide variant(s); 4) Contig sequences with structural differences to that of the ppgm assigned in this study; 5) Contig sequences not described in the ppgm.
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BMC Genomics

ISSN: 1471-2164

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