Table 3 The eQTLs for target genes of PAL, CHS , IFS and F3H

PAL

^dqPALB2_1

14(B2)

Satt560

Satt560 ~ Satt556

0.01

2011Harbin

3.39

8.11

^dqPALD2_1

17(D2)

Sat_209

Sat_209 ~ Sat_022

15.90

2011Harbin

4.24

6.67

CHS

qCHSA1_1

05(A1)

Satt 236

Satt 236-D26A

0.01

2011Harbin

5.48

4.21

qCHSDla_1

01(Dla)

Satt436

Satt436-Sat_345

0.01

2011Harbin

8.64

2.71

qCHSDlb_1

02(Dlb)

Satt546

Satt546-Satt459

214.80

2011Harbin

2.55

2.13

qCHSDlb_2

02(Dlb)

Satt546

Satt546-Satt459

211.22

2011Harbin

2.18

3.90

^dqCHSD2_1

17(D2)

Satt528

Satt528-Satt256

10.74

2011Harbin

2.73

2.07

qCHSF_1

13(F)

Sat_234

Sat_234-Satt149

46.17

2011Harbin

2.72

3.57

qCHSL_1

19(L)

Satt278

Satt278-Sat_134

14.00

2011Harbin

2.40

15.65

qCHSL_2

19(L)

Sat_134

Sat_134-Sct_010

24.51

2011Harbin

2.09

9.98

IFS

^dqIFSA2_1

08(A2)

Sat_129

Sat_129-Sat_181

55.45

2011Harbin

7.46

17.67

^dqIFSC1_1

04(C1)

Sat_042

Sat_042-Satt524

6.67

2011Harbin

5.63

22.8

^dqIFSD2_1

17(D2)

Satt186

Satt186-Satt226

54.88

2011Harbin

8.87

16.67

qIFSF_1

13(F)

Satt569

Satt569-Satt423

6.97

2011Harbin

3.09

15.84

qIFSF_2

13(F)

Sat_234

Sat_234-Satt149

56.01

2011Harbin

10.92

17.89

^dqIFSH_1

12(H)

Satt302

Satt302-Satt279

0.01

2011Harbin

3.23

7.27

^dqIFSL_1

19(L)

Sat_134

Sat_134-Satt278

20.99

2011Harbin

7.26

16.12

^dqIFSL_2

19(L)

Sct_010

Sct_010-Sat_134

43.95

2011Harbin

9.75

17.97

qIFSN_1

03(N)

Satt152

Satt152-Satt530

6.67

2011Harbin

2.50

27.42

qIFSN_2

03(N)

Satt530

Satt530-Satt152

29.53

2011Harbin

2.50

12.80

^dqIFSO_1

10(O)

Satt345

Satt345-Satt592

6.00

2011Harbin

9.43

19.43

^dqIFSO_2

10(O)

Sat_341

Sat_341-Satt585

88.39

2011Harbin

9.78

15.69

F3H

^dqF3HC2_1

06(C2)

Satt322

Satt322-Satt658

57.64

2011Harbin

2.27

2.37

qF3HDlb_1

02(Dlb)

Satt157

Satt157-Satt271

25.71

2011Harbin

3.62

10.01

^dqF3HDlb_2

02(Dlb)

Sat_135

Sat_135-Sat_096

30.28

2011Harbin

7.53

14.32

qF3HDlb_3

02(Dlb)

Sat_069

Sat_069-Sat_279

168.62

2011Harbin

2.41

8.49

^dqF3HDlb_4

02(Dlb)

Satt459

Satt459-Sat_069

185.58

2011Harbin

2.18

5.54

^dqF3HD2_1

17(D2)

Satt031

Satt031-Sat_326

0.01

2011Harbin

2.67

1.05

^dqF3HE_1

15(E)

Sat_112

Sat_112-Sat_380

22.09

2011Harbin

2.10

4.85

^dqF3HF_1

13(F)

Sat_262

Sat_262-Sat_103

101.22

2011Harbin

2.63

2.24

^dqF3HK_1

09(K)

Satt349

Satt349-Satt518

141.56

2011Harbin

2.08

1.57

^dqF3HN_1

03(N)

Sat_084

Sat_084-Sat_304

41.45

2011Harbin

4.70

6.10

^dqF3HO_1

10(O)

Satt592

Satt592-Satt633

27.54

2011Harbin

2.62

2.32