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Table 4 Identification of candidate genes underlying overlapped locus of eQTL and QTL

From: Expression quantitative trait loci infer the regulation of isoflavone accumulation in soybean (Glycine max L. Merr.) seed

  Marker interval

  Gm(LG)

  Physical location of markers

Candidate genes

Physical location of candidate genes

Function of candidate genes

Satt546-Satt459

Gm02(LGD1b)

43,775,407-48,390,089

Glyma02g40290.1

45,490,798-45,495,043

C4H

Glyma02g47940.1

51,366,326-51,368,943

PAL1

Satt186-Satt226

Gm17(LG D2)

26,768,866-39,047,375

Glyma17g34430.1

38,398,978-38,401,025

CHI

Glyma17g37060.1

40,920,379-40,923,898

DFR

Satt423-Satt569

Gm13(LG F)

5,231,035-9,567,285

Glyma13g01080.1/2

798,836-805,844

4CL

Glyma13g02740.1

2,707,784-2,712,790

FLS

Glyma13g09640.1

11,153,569-11,158,812

CHS

Satt149-Sat_234

Gm13(LG F)

4,976,740-26,460,745

Glyma13g24200.1

27,567,360-27,569,061

IFS

Glyma13g20800.1

24,273,025-24,278,037

PAL1

Glyma13g27380.1

30,577,113-30,579,230

DFR

Glyma13g09640.1

11,153,569-11,158,812

CHS

Glyma13g02740.1

2,707,784-2,712,790

FLS

Sat_262-Sat_103

Gm13(LG F)

7,233,012-25,478,474

Glyma13g20800.1

24,273,025-24,278,037

PAL1

Glyma13g24200.1

27,567,360-27,569,061

IFS

Glyma13g09640.1

11,153,569-11,158,812

CHS

 

Glyma13g02740.1

2,707,784-2,712,790

FLS