Table 2 Accuracy and chimericity statistics
From: Evaluation of viral genome assembly and diversity estimation in deep metagenomes
Accuracy | Accuracy >90%a | Chimericity | Non-chimericb | |
|---|---|---|---|---|
a) High-coverage mock | ||||
454- CAMERA | 99.8 ± 0.5 | 99.9% | 0.93 ± 1.09 | 42.9% |
454-CLC | 99.1 ± 3.4 | 99.4% | 0.90 ± 1.01 | 41.2% |
GAIIx-CLC | 94.0 ± 14.0 | 86.0% | 1.30 ± 1.03 | 7.00% |
GAIIx-IDBA | 99.9 ± 1.1 | 99.7% | 1.27 ± 0.94 | 6.10% |
GAIIx-IDBA* | 99.9 ± 1.4 | 99.7% | 1.25 ± 0.95 | 6.20% |
b) Low-coverage mock | ||||
454– CAMERA | 99.2 ± 3.4 | 99.9% | 0.59 ± 0.87 | 53.8% |
GAIIx–IDBA | 99.6 ± 1.6 | 99.6% | 1.27 ± 0.78 | 8.60% |
GAIIx-IDBA* | 99.5 ± 3.1 | 99.4% | 1.26 ± 0.79 | 20.5% |
Miseq-IDBA | 99.5 ± 3.7 | 98.7% | 1.32 ± 0.99 | 21.9% |
Hiseq-IDBA | 98.7 ± 3.9 | 98.2% | 1.32 ± 0.87 | 5.20% |