From: Computational analysis of auxin responsive elements in the Arabidopsis thaliana L. genome
AuxRE variant | Total amount of genes with AuxRE (Z) | Total amount of genes with conservative AuxRE | Up-regulated (1965 genes; 9.3%) 1 | Down-regulated (1916 genes; 9.1%) 1 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
 |  |  | With AuxRE | With conservative AuxRE | With AuxRE | With conservative AuxRE | ||||
 |  |  | Amount (Xup) | %, Xup/Z2 | Amount (Yup) | %, Yup/Xup3 | Amount (Xdown) | % , Xdown/Z2 | Amount (Ydown) | % , Ydown/Xdown3 |
TGTCTC | 12635 | 4496 | 1221 | 9.7% | 927 | 75.9% | 1141 | 9.0% | 746 | 65.4% |
TGTCGG | 5054 | 1696 | 449 | 8.88% | 334 | 74.4% | 454 | 8.98% | 297 | 65.42% |
TGTSTSBC | 6829 | 1978 | 657 | 9.6% | 504 | 76.7%* | 605 | 8.9% | 396 | 65.5% |
AuxRE PWM | 3799 | 1020 | 372 | 9.8% | 290 | 78.0%* | 354 | 9.3% | 229 | 64.7% |
AuxRE SGA | 4679 | 1321 | 481 | 10.3%* | 364 | 75.7% | 438 | 9.4% | 296 | 67.6% |
AuxRE P&S | 1779 | 468 | 191 | 10.7%* | 158 | 82.7%** | 167 | 9.4% | 115 | 68.9% |