Figure 2

Proportion of ESS values below the minimum threshold (100) for convergence for the ten 11-taxon strongILS datasets. We show results when running BBCA (using 24 hours per 25-gene bin, in blue), *BEAST (using 48 hours on the sets of 100 genes, in green) or *BEAST (using 96 hours, in dark red). We report these proportions for seven different statistics: (1) posterior, (2) prior, (3) likelihood, (4) species.coalescent, (5) species.popSizesLikelihood, (6) speciation.likelihood, (7) species.popMean. Thus, BBCA has converged for 85-95% of the runs, using 24 hours per bin. In contrast, *BEAST has converged for only 60-90% of the runs after running for 96 hours.