Algorithm | Parameter | Value | Algorithm | Parameter | Value |
---|---|---|---|---|---|
CLUSTAL Omega | Sequence type | DNA | MUSCLE | Output format | Pearson/Fasta |
CLUSTAL Omega | Output format | Pearson/Fasta | MUSCLE | Output tree | none |
CLUSTAL Omega | Dealing input sequences | false | MUSCLE | Output order | aligned |
CLUSTAL Omega | Mbed-like clustering guide-tree | true | Â | Â | Â |
CLUSTAL Omega | Mbed-like clustering iteration | true | Â | Â | Â |
CLUSTAL Omega | Number of combined iterations | 0 | Â | Â | Â |
CLUSTAL Omega | Max guide tree iterations | -1 | Â | Â | Â |
CLUSTAL Omega | Max hmm iterations | -1 | Â | Â | Â |
CLUSTAL Omega | Order | aligned | Â | Â | Â |