Table 2 Area under the curve (AUC) of ROC in different background conditions (low, intermediate or high levels of non-exonic mapped reads) using DESeq and XBSeq, when comparing 3 or 6 replicates in each test group.
From: Differential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads
| Â | DESeq Different background levels | XBSeq Different background levels | ||||
|---|---|---|---|---|---|---|
Replicates per group | Low | Intermediate | High | Low | Intermediate | High |
3 | 0.69 | 0.66 | 0.64 | 0.82 | 0.78 | 0.72 |
6 | 0.76 | 0.73 | 0.70 | 0.89 | 0.86 | 0.80 |