Table 6 List of genes differentially expressed in bursal cells and DT40
From: Evaluation of the chicken transcriptome by SAGE of B cells and the DT40 cell line
Unitag | Busage | DT40sage | Significance | Sequence ID# | Best BLAST result## |
|---|---|---|---|---|---|
CATGGCAGGGGGCGGAAACCT | 4 | 45 | 2.83E-10 | riken1_2o24 | (AAH61765) Hypothetical protein |
CATGGTGAGCCAAGGTGTTGT | 24 | 82 | 2.06E-9 | riken1_4m1 | (AAH69219) Cold inducible RNA-binding protein |
CATGCAGAAATAAGCTTCTCC | 45 | 109 | 4.09E-8 | riken1_7b15 | (Q7ZUR6) Similar to muscle-specific beta 1 integrin binding protein |
CATGAGCGGGGGCAGCACTTG | 118 | 203 | 5.75E-7 | riken1_25p23 | (Q90YW7) Ribosomal protein L4 |
CATGCTGGAAGAAAGAATAAC | 46 | 114 | 1.92E-8 | riken1_32c11 | (Q9YGQ1) Peptide elongation factor 1-beta |
CATGCGCTCTCCTTTTAAAAG | 9 | 41 | 2.67E-6 | riken1_15l3 | (CAA31409) Chinese hamster asparagine synthetase |
CATGGATGGCCAGCAAGTGTT | 29 | 4 | 1.17E-5 | riken1_4k19 | (P13796) L-plastin (Lymphocyte cytosolic protein 1) |
CATGTCCGTGGCATCCTTTGA | 0 | 16 | 1.18E-5 | riken1_24e23 | (Q8BGQ8) Heterogeneous nuclear ribonucleoprotein K |
CATGGCTTTGGAATATTTGAC | 25 | 3 | 2.90E-5 | riken1_2f9 | (AAH46152) Selenoprotein P precursor |
CATGGAGTCCATAACACGGCG | 21 | 2 | 6.88E-5 | riken1_34m12 | (Q96CJ1) Testosterone regulated apoptosis inducer and tumor suppressor |
CATGCAAAGTGCCCTTGGCTT | 17 | 1 | 1.46E-4 | riken1_10g19 | (P30281) G1/S-specific cyclin D3 |
CATGTAAGCCAATTCTGAACC | 19 | 1 | 4.09E-5 | riken1_33a18 | (Q8JHJ4) TNF family B cell activation factor |
CATGTTGTACACACGGGCACT | 11 | 0 | 5.79E-4 | riken1_5g12 | (Q90YB0) FEN-1 nuclease |
CATGTGCCCGTGACCCCCATC | 2 | 16 | 6.12E-4 | riken1_4n15 | (Q13200) 26S proteasome non-ATPase regulatory subunit 2 |
CATGTCGTGCTCTGTGCCTCC | 5 | 26 | 9.28E-5 | riken1_2i9 | (Q90W60) XNop56 protein |
CATGCTTTCTGCTTTGACTTT | 21 | 4 | 9.42E-4 | riken1_12p16 | (P22794) Ecotropic viral integration site 2A protein |
CATGTTTGTGCATAGCTGTCC | 5 | 28 | 1.17E-5 | riken1_30e3 | (Q91XC8) Similar to death-associated protein |
CATGGCCGGGCGCCCCACCAG | 0 | 15 | 2.41E-5 | riken1_15i13 | (Q99P44) Leucine aminopeptidase |
CATGGGACCAACAAATAAAGC | 19 | 4 | 0.0027 | riken1_4o10 | (P97440) Histone RNA hairpin-binding protein |
CATGAAAATGTACTGTGCTAA | 2 | 13 | 0.0036 | riken1_20p3 | (P34022) Ran-specific GTPase-activating protein |
CATGTATACAGAACTGCTGGA | 8 | 0 | 0.0044 | riken1_2i24 | (Q9UMR2) ATP-dependent RNA helicase DDX19 |
CATGGCCAAATTAGAGGAGTG | 1 | 10 | 0.0051 | riken1_32c11 | (Q9YGQ1) Peptide elongation factor 1-beta |
CATGCTACGCTGTGTCTGCCA | 11 | 1 | 0.0062 | riken1_2m14 | (AAQ20009) Heterogeneous nuclear ribonucleoprotein H1-like protein |
CATGCTCTCCGGTGGTACAAT | 0 | 7 | 0.0070 | riken1_32c11 | (Q9YGQ1) Peptide elongation factor 1-beta |
CATGTTGATTCCTATGCTAAA | 7 | 0 | 0.0087 | riken1_3a6 | (Q9H165) B-cell lymphoma/leukemia 11A |