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Table 4 Identification of Solanaceae specific transcripts. Number of transcripts identified in the Solanaceae gene indices with no matches in Arabidopsis, rice or any of the 21 plant gene indices; * including Arabidopsis and rice.

From: Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts

 

Total

Transcripts with no matches in Arabidopsis or rice

Transcripts with no matches in plant Gene Indices *

Potato

38239

10951 (29%)

8465 (22%)

Tomato

31838

7756 (24%)

6209 (20%)

Pepper

13003

3287 (25%)

2699 (21%)

Tobacco

21107

11671 (55%)

10251 (49%)

Petunia

4466

1064 (24%)

855 (19%)

N. benthamiana

7554

1481 (20%)

1109 (15%)