Table 1 Selected GO terms significantly enriched toward high 2 kb upstream alignment scores. P-values are Bonferroni-corrected. b,m,c represents GO hierarchy (b:biological process, m:molecular function, and c:cellular component). mean: mean alignment score. The mean alignment score for all the genes analyzed is 411.01.
GO accession | GO term definition | p-value | mean | # genes | |
|---|---|---|---|---|---|
GO:0007275 | b | development | 2.69E-48 | 860.98 | 1432 |
GO:0009653 | b | morphogenesis | 2.82E-47 | 898.06 | 949 |
GO:0009887 | b | organogenesis | 1.50E-42 | 911.47 | 765 |
GO:0048513 | b | organ development | 1.50E-42 | 911.47 | 765 |
GO:0007154 | b | cell communication | 8.30E-38 | 799.48 | 2473 |
GO:0007165 | b | signal transduction | 4.61E-24 | 791.28 | 1969 |
GO:0007399 | b | neurogenesis | 7.04E-22 | 945.20 | 322 |
GO:0003700 | m | transcription factor activity | 1.63E-20 | 892.63 | 673 |
GO:0050877 | b | neurophysiological process | 4.29E-09 | 836.34 | 435 |
GO:0019226 | b | transmission of nerve impulse | 7.07E-06 | 888.41 | 197 |
GO:0007268 | b | synaptic transmission | 1.07E-05 | 889.12 | 192 |
GO:0016055 | b | Wnt receptor signaling pathway | 4.19E-04 | 989.45 | 78 |