Table 2 List of the combinations of abundance levels and differential expression ratios corresponding to biologically realistic scenarios used in simulations
From: An analysis of the use of genomic DNA as a universal reference in two channel DNA microarrays
C1 (pM) | C2 (pM) | Differential expression | Comment |
|---|---|---|---|
0.1 | 0.2 | 2 | Rare species upregulated 2 fold |
1 | 2 | 2 | Intermediate species upregulated 2 fold |
20 | 10 | 2 | Abundant species downregulated 2 fold |
0.1 | 1 | 10 | Rare species upregulated 10 fold |
1 | 10 | 10 | Intermediate species upregulated 10 fold |
20 | 200 | 10 | Abundant species upregulated 10 fold |
0.1 | 10 | 100 | Rare species upregulated 100 fold |
1 | 100 | 100 | Intermediate species upregulated 100 fold |