Table 2 A Listing of the Identified Chlamydiaceae-specific proteins
Protein Loci | Protein (Name/Size) | C. tra | C. mur | C. pne | C. cav | C. abo | Next best BLAST hit (E value, protein length) |
|---|---|---|---|---|---|---|---|
CT006 (AAC67596) | hypoth, 189aa | 3e-95 | 6e-72 | 3e-12 | 9e-10 | 2e-09 | Listeria anguillarum (0.45, 314aa) |
CT005 (AAC67595) | hypoth, 363aa | 1e-117 | 4e-63 | 3e-18, 417aa | 8e-20 | 1e-20 | Ashbya gossypii (0.86, 2272aa) |
CT018 (AAC 67608) | hypoth, 157aa | 3e-89 | 5e-53 | 2e-10 | 8e-09 | 3e-06 | Acetabularia acetabulum (3.9, 613aa) |
CT046 (AAC67637) | Histone-like protein HC2, 203aa | 2e-29 | 2e-25 | 2e-05, 172aa | 8e-08, 152aa | 2e-08 | No other BLAST hits |
CT080 (AAC67671) | LtuB protein, 97aa | 3e-50 | 4e-37 | 3e-11 | 2e-13 | 9e-16 | Clostridium tetani (0.73, 311aa) |
CT082 (AAC67673) | hypoth, 560aa | 0 | 0 | 7e-91 | 8e-103 | 2e-102 | Saccharomycecs cerevisiae (2.0, 1537aa) |
CT083 (AAC67674) | hypoth, 160aa | 1e-71 | 1e-57 | 7e-30 | 4e-29 | 9e-25 | Pseudomonas putida (0.17, 1162aa) |
CT109 (AAC67700) | hypoth, 262aa | 2e-149 | 9e-133 | 8e-66 | 4e-70 | 7e-70 | Plasmodium falciparum (1.1, 1057aa) |
CT142 (AAC67733) | hypoth, 285aa | 3e-155 | 2e-109 | 1e-39 | 9e-50 | 6e-49 | Heterobasidion annosum (5.0, 507aa) |
CT143 (AAC67734) | hypoth, 280aa | 3e-165 | 3e-123 | 2e-36 | 9e-55 | 4e-56 | porcine (0.26, 725aa) |
CT144 (AAC67735) | hypoth, 285aa | 2e-143 | 3e-101 | 7e-28 | 9e-34 | 6e-31 | Staphylococcus aureus (0.041, 154aa) |
CT147 (AAC67738) | hypoth, 1449aa | 0 | 0 | 3e-71 | 4e-88 | 4e-91 | Homo sapiens (8e-10, 2442aa) |
CT178 (AAC67769) | hypoth, 404aa | 0 | 0 | 3e-114 | 3e-120 | 4e-122 | Thiobacillus denitrificans (2e-15, 830aa) |
CT195 (AAC67787) | hypoth, 363aa | 0 | 2e-147 | 8e-55 | 4e-71 | 1e-68 | Escherichia coli (1.5, 346aa) |
CT232 (AAC67824) | IncB, 115aa | 7e-45 | 1e-29 | 4e-11 | 2e-08 | 7e-10 | Canis familiaris (0.59, 472aa) |
CT233 (AAC67825) | IncC, 178aa | 9e-75 | 3e-38 | 0.52, 203aa | 4e-04 | 0.006,184aa | Tetraodon nigroviridis (0.5, 1010aa) |
CT253 (AAC67846) | hypoth, 215aa | 5e-108 | 2e-99 | 2e-67 | 5e-72 | 8e-73 | Schizosaccharomyces pombe (0.12, 880aa) |
CT263 (AAC67856) | hypoth, 196aa | 7e-109 | 1e-72 | 5e-23 | 2e-31 | 1e-29 | Mycobacterium bovis (2.4, 744aa) |
CT288 (AAC67881) | hypoth, 563aa | 0 | 3e-175 | 6e-16 | 5e-23 | 1e-25 | Debaryomyces hansenii (4e-04, 2042aa) |
CT289 (AAC67882) | hypoth, 379aa | 3e-167 | 3e-95 | 6e-27 | 6e-38 | 5e-31 | Streptococcus pyogenes (0.049, 535aa) |
CT324 (AAC67917) | hypoth, 303aa | 1e-161 | 8e-115 | 1e-50 | 6e-55 | 1e-55 | Brucella melitensis (0.29, 263aa) |
CT330 (AAC67925) | hypoth, 90aa | 2e-44 | 1e-32 | 3e-07 | 3e-04 | 1e-05 | Oryza sativa (2.7, 677aa) |
CT338 (AAC67933) | hypoth, 153aa | 1e-86 | 1e-66 | 1e-23 | 2e-29 | 5e-28 | Acinetobacter sp. (1.6, 304aa) |
CT365 (AAC67961) | hypoth, 575aa | 0 | 4e-156 | 3e-58 | 7e-63 | 1e-61 | No other BLAST hits |
CT372 (AAC67968) | hypoth, 442aa | 0 | 0 | 1e-114 | 2e-116 | 3e-119 | Bradyrhizobium japonicum (0.016, 675aa) |
CT377 (AAC67973) | LtuA, 46aa | 4e-20 | 8e-19 | 2e-08 | 6e-11 | 5e-10 | No other BLAST hits |
CT383 (AAC67979) | hypoth, 243aa | 7e-140 | 1e-88 | 3e-26 | 2e-35 | 2e-28 | Burkholderia fungorum (2.9, 780aa) |
CT392 (AAC67989) | yprS, 377aa | 0 | 2e-116 | 1e-07 | 1e-14 | 3e-07 | Saccharomyces cerevisiae (0.048, 1038aa) |
CT412 (AAC68009) | PmpA, 975aa | 0 | 0 | 8e-141 | 3e-179 | 4e-175 | many other chlamydiae hits in between Chloroflexus aurantiacus (3e-05, 767aa) |
CT413 (AAC68010) | PmpB, 1751aa | 0 | 0 | 0 | 0 | 0 | Chloroflexus aurantiacus, 8e-10, 767aa |
CT421.1 (AAC68030) | hypoth, 53aa | 7e-23 | 3e-20 | 4e-15 | 6e-12 | 1e-14 | Bradyrhizobium japonicum (3.8, 803aa) |
CT440 (AAC68039) | hypoth, 112aa | 1e-58 | 2e-45 | 6e-08 | 1e-04 | 4e-07 | Homo sapiens (0.017, 100aa) (partial) |
CT442 (AAC68041) | 15kDa SRP, 150aa | 7e-70 | 1e-33 | 1e-04 | 1e-12 | 3e-12 | No other BLAST hits |
CT444 (AAC68043) | OmcA, 88aa | 1e-39 | 4e-31 | 2e-12 | 6e-15 | 6e-15 | Ovis aries (0.14, 197aa) ** |
CT466 (AAC68066) | hypoth, 109aa | 5e-48 | 7e-39 | 2e-24 | 1e-26 | 1e-27 | Geobacter metallireducens (0.55, 557aa) |
CT471 (AAC68071) | hypoth, 200aa | 5e-112 | 1e-103 | 1e-46 | 1e-62 | 5e-63 | Azoarcus sp. (1.9, 168aa) |
CT482 (AAC68082) | hypoth, 217aa | 1e-115 | 1e-91 | 1e-49 | 6e-60 | 4e-64 | Legionella pneumophila (1.8, 438aa) |
CT483 (AAC68083) | hypoth, 121aa | 1e-51 | 1e-36 | 6e-06 | 2e-08 | 4e-08 | Rubrobacter xylanophilus (0.14, 293aa) |
CT529 (AAC68131) | hypoth, 298aa | 1e-151 | 2e-91 | 4e-36 | 1e-38 | 8e-42 | Aspergillus nidulans (1.9, 274aa) |
CT552 (AAC68154) | hypoth, 135aa | 6e-72 | 1e-41 | 5e-04 | 3e-06 | 7e-07 | Guillardia theta (0.19, 263aa) |
CT565 (AAC68167) | hypoth, 147aa | 7e-79 | 1e-69 | 1e-41 | 3e-46 | 7e-48 | Caenorhabditis elegans (0.11, 317aa) |
CT566 (AAC68168) | hypoth, 330aa | 8e-175 | 6e-141 | 8e-86 | 4e-89 | 1e-87 | Vibrio vulnificus (0.26, 506aa) |
CT567 (AAC68169) | hypoth, 174aa | 1e-87 | 9e-61 | 5e-24 | 2e-17 | 2e-17 | Takifugu rubripes (4.1, 1374aa) |
CT568 (AAC68170) | hypoth, 151aa | 2e-71 | 4e-48 | 2e-22 | 2e-18 | 5e-18 | Giardia lamblia (1.6, 6739aa) |
CT577 (AAC68179) | hypoth, 119aa | 1e-60 | 3e-48 | 6e-16 | 3e-26 | 2e-26 | Giardia lamblia (0.050, 551aa) |
CT578 (AAC68180) | hypoth, 487aa | 8e-175 | 3e-150 | 4e-81 | 2e-99 | 1e-103 | Candida glabrata (0.023, 592aa) |
CT579 (AAC68181) | hypoth, 439aa | 3e-141 | 8e-115 | 2e-76 | 4e-77 | 1e-81 | No other BLAST hits |
CT589 (AAC68191) | hypoth, 602aa | 0 | 0 | 1e-126 | 1e-145 | 3e-146 | Bacillus subtilis (0.052, 605aa) |
CT618 (AAC68222) | hypoth, 266aa | 1e-142 | 6e-87 | 8e-10 | 4e-19, 306aa | 5e-22 | Drosophila melanogaster (0.11, 1868aa) |
CT620 (AAC68224) | hypoth, 838aa | 0 | 0 | 0 | 1e-180 | 2e-177 | Borrelia burgdorferi (0.29, 735aa) |
CT646 (AAC68823) | hypoth, 459aa | 0 | 0 | 3e-60 | 1e-68 | 5e-66 | Aspergillus nidulans (5.9, 629aa) |
CT647 (AAC68824) | hypoth, 192aa | 2e-98 | 5e-65 | 2e-18 | 1e-15 | 3e-13 | Ciona intestinalis (1.8, 407aa) |
CT651 (AAC68828) | hypoth, 608aa | 0 | 0 | 1e-97 | 7e-97 | 3e-95 | Bacteroides thetaiotaomicron (0.15, 1003aa) |
CT654 (AAC68249) | hypoth, 162aa | 5e-81 | 9e-75 | 1e-27 | 1e-32 | 1e-33 | Mesocricetus auratus (2.5, 210aa) |
CT668 (AAC68263) | hypoth, 223aa | 1e-114 | 9e-93 | 6e-69 | 5e-78 | 1e-76 | Bacillus halodurans (0.045, 324aa) |
CT671 (AAC68266) | hypoth, 283aa | 2e-149 | 1e-115 | 2e-63 | 2e-76 | 1e-72 | Giberella zeae (0.053, 595aa) |
CT681 (AAC68276) | MOMP, 393aa | 0 | 7e-176 | 2e-139 | 3e-137 | 2e-136 | No other BLAST hits except chlamydiae |
CT695 (AAC68290) | hypoth, 398aa | 0 | 7e-147 | 6e-12 | 2e-23 | 2e-22 | Ustilago maydis (0.44, 417aa) |
CT696 (AAC68291) | hypoth, 403aa | 0 | 3e-179 | 6e-59 | 3e-70 | 2e-73 | Mus musculus (0.031, 708aa) |
CT712 (AAC68307) | hypoth, 390aa | 0 | 0 | 8e-101 | 1e-129 | 1e-132 | Mus musculus (0.086, 3159aa) |
CT713 (AAC68308) | PorB, 340aa | 0 | 0 | 5e-120 | 2e-133 | 5e-132 | No other BLAST hits except chlamydiae |
CT718 (AAC68313) | hypoth, 174aa | 3e-93 | 8e-81 | 3e-44 | 2e-46 | 6e-47 | Prochlorococcus marinus (0.82, 250aa) |
CT744 (AAC68339) | phosphoprotein, 821aa | 0 | 0 | 2e-138 | 1e-153 | 3e-160 | Cytophaga hutchinsonii (0.38, 466aa) |
CT753 (AAC68348) | hypoth, 74aa | 3e-34 | 4e-27 | 1e-13, 76aa | 2e-13 | 2e-13 | Cycas necrotic stunt virus (1.3, 559) |
CT763 (AAC68358) | hypoth, 139aa | 6e-72 | 3e-52 | 2e-28 | 3e-23 | 2e-22 | Drosophila pseudoobscura (2.6, 773aa) |
CT795 (AAC68390) | hypoth, 163aa | 1e-79 | 7e-46 | 1e-13 | 3e-13 | 2e-14 | Pan troglodytes (0.52, 924aa) |
CT812 (AAC68408) | OmpD, 1531aa | 0 | 0 | 0 | 0 | 0 | Rhodopirelulla baltica (2e-04, 703aa) |
CT846 (AAC68443) | hypoth, 234aa | 1e-123 | 1e-108 | 7e-67 | 3e-64 | 1e-66 | Streptomyces coelicolor (2.1, 689aa) |
CT847 (AAC68444) | hypoth, 172aa | 2e-88 | 8e-73 | 1e-53 | 1e-53 | 2e-52 | Saccharomyces cerevisiae (0.001, 1434aa) |
CT848 (AAC68445) | hypoth, 168aa | 1e-76 | 5e-67 | 2e-55 | 6e-54 | 8e-54 | Drosophila pseudoobscura (0.34, 1000aa) |
CT849 (AAC68446) | hypoth, 159aa | 4e-74 | 1e-64 | 2e-57 | 1e-56 | 4e-57 | Gallus gallus (0.034, 1546aa) |
CT860 (AAC68458) | hypoth, 493aa | 0 | 1e-132 | 2e-56 | 4e-73 | 4e-77 | Leishmania major (0.26, 1346aa) |
CT861 (AAC68459) | hypoth, 506aa | 0 | 7e-172 | 6e-67 | 9e-74 | 5e-76 | Vibrio fischeri (0.008, 1023aa) |
CT863 (AAC68461) | hypoth, 482aa | 0 | 2e-150 | 7e-82 | 2e-86 | 7e-90 | Mus musculus (0.006, 1043aa) |
CT869 (AAC68467) | OmpE, 964aa | 0 | 0 | 9e-108 | 1e-119 | 8e-112 | Escherichia coli (9e-05, 1250aa) |
CT870 (AAC68468) | OmpF, 1034aa | 0 | 0 | 1e-40, 931aa | 2e-41 | 5e-46 | long list of chlamydiae homologs ; Dictyostelium discoideum (4e-04, 485aa) |
CT871 (AAC68469) | OmpG, 1013aa | 0 | 0 | 4e-127 | 7e-180 | 2e-175 | long list of chlamydiae homologs ; Desulfotalea psychrophila (8e-07, 2363aa) |
CT872 (AAC68470) | OmpH, 1016aa | 0 | 0 | 6e-152, 978aa | 0 | 0 | long list of chlamydiae homologs ; Crocosphaera watsonii (0.28, 822aa) |
CT874 (AAC68472) | OmpI, 878aa | 0 | 0 | 2e-81, 930aa | 9e-73, 942aa | 2e-77 | long list of chlamydiae homologs ; Nostoc punctiforme (0.006, 1851aa) |