Table 4 Listing and Characteristics of Chlamydophila-specific proteins
Protein Loci | Protein Name/Size | C. cav | C. abo | C. pne | Next Best Hit |
|---|---|---|---|---|---|
CCA00062 (AAP04814) | YwbM, 463aa | 0 | 6e-113, 501aa | 1e-14, 382aa | Aspergillus nidulans (0.56, 182aa) |
CCA00177 (AAP04928) | hypoth, 367aa | 0 | 1e-146, 370aa | 7e-35, 366aa | Tetraodon nigroviridis (2.7, 659aa) |
CCA00189 (AAP04940) | hypoth, 316aa | 0 | 2e-111, 316aa | 3e-60, 312aa | Novosphingobium aromaticivorans (0.010, 331aa) |
CCA00222 (AAP04973) | put. mb. protein, 123aa | 1e-55 | 6e-22, 113aa | 3e-05, 110aa | Campellolebias dorsimaculatus, (0.04, 348aa) |
CCA00246 (AAP04997) | put. lipoprotein, 313aa | 0 | 6e-158, 314aa | 3e-96, 317aa | No other BLAST hits |
CCA00261 (AAP05012) | put. mb. protein, 1044aa | 0 | 0, 1105aa | 3e-64, 1033aa | Capsicum annuum (0.18, 576aa) |
CCA00296 (AAP05045) | hypoth, 448aa | 0 | 4e-74, 442aa | 2e-35, 445aa | Ralstonia eutropha (1.6, 556aa) |
CCA00299 (AAP05048) | hypoth, 288aa | 5e-146 | 4e-96, 288aa | 3e-45, 289aa | Neurospora crassa (1.4, 541aa) |
CCA00352 (AAP05100) | hypoth, 197aa | 3e-95 | 2e-60, 204aa | 5e-12, 212aa | Cryptophlebia leucotreta (0.016, 395aa) |
CCA00353 (AAP05101) | hypoth, 186aa | 3e-85 | 3e-60, 205aa | 1e-11, 175aa | Mus musculus (0.12, 718aa) |
CCA00360 (AAP05108) | put. inner mb. protein, 97aa | 4e-47 | 4e-28, 104aa | 1e-04, 101aa | Arabidopsis thaliana (0.58, 513aa) |
CCA00361 (AAP05109) | put. inner mb. protein,, 110aa | 4e-57 | 2e-42, 110aa | 0.014, 111aa | Bacillus licheniformis (1.3, 416aa) |
CCA00434 (AAP05180) | put. inner mb. protein, 451aa | 0 | 4e-125, 435aa | 6e-34, 424aa | other Chlamydophila hits ; Apis mellifera (0.93, 1500aa) |
CCA00497 (AAP05241) | hypoth, 471aa | 0 | 3e-173, 471aa | 1e-55, 515aa | Trophyrema whipplei (2.9, 735aa) |
CCA00530 (AAP05273) | hypoth, 424aa | 0 | 1e-32, 435aa | 6e-26, 435aa | Fusobacterium nucleatum (3.2, 448aa) |
CCA00575 (AAP05317) | put. lipoprotein, 294aa | 3e-165 | 1e-97, 277aa | 3e-59, 284aa | Wolinella. succinogenes (2.5, 329aa) |
CCA00576 (AAP05318) | hypoth 170aa | 7e-88 | 1e-43, 155aa | 2e-18, 164aa | Melanoplus sanguinipes (0.36, 254aa) |
CCA00578 (AAP05320) | put. lipoprotein, 280aa | 1e-160 | 7e-08, 277aa | 2e-05, 284aa | Plasmodium falciparum (1.3, 294aa) |
CCA00621 (AAP05363) | PTMP, 108aa | 3e-54 | 2e-33, 108aa | 4e-09, 161aa | Agrobacterium tumefaciens (0.34, 279aa) |
CCA00738 (AAP05479) | lipoprotein, 95aa | 5e-35 | 3e-15, 99aa | 0.003, 99aa | Mycobacterium leprae (8.5, 574aa) |