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Table 4 Deletion regions from the less conservative "LOH/Model B"

From: Genome-wide loss of heterozygosity and copy number alteration in esophageal squamous cell carcinoma using the Affymetrix GeneChip Mapping 10 K array

Chr arm

No. deletion regions in each chr arm

Cytoband(s)

Total no. SNPs in each chr arm

2q

1

2q35

6

3p

6

3p26-p25 3p25-p24.3 3p24 3p24-p14 3p14-p13 3p13

293

4p

4

4p16-p15.3 4p15.3 4p15.1-p13 4p12-q12

150

4q

5

4q21 4q21.2-q22 4q22-q31.2 4q31.2-q34 4q34-q35

486

5q

8

5q11.2-q15 5q15 5q21 5q22 5q23 (2) 5q32-q34 5q34-q35

357

6p

5

6p24-p23 6p22.3 6p22.2-p21.2 6p21.2 6p11.2-q12

75

6q

1

6q15

21

8p

4

8p23.2 8p22(3)

32

9p/q

3

9p24.3 9p24.3-p22 9p22-q33

507

10p

1

10p12.1-p11.2

5

11p

1

11p15.2

6

11q

2

11q23 11q24

20

13q

4

13q12.2-q31.1 13q31.1 13q32.1 13q32.1-q34

391

14q

10

14q11.2-q12 14q12 (2) 14q21 (3) 14q23 (2) 14q23-q24.2 14q24.3

138

15q

10

15q11.2-q14 15q14 15q14-q15 15q15-q21.1 15q21.1 15q21.3-q23 15q25 (3) 15q25-q26.2

190

17p/q

1

17p13-q25

174

18q

4

18q21.1-q21.2 18q21.2 18q22 (2)

47

21q

1

21q22.1

10

22q

1

22q12.1-q12

8

Total no. deletion regions

72

Total no. SNPs

2916