Table 2 Ultra-CNMSs in Arabidopsis-Brassica orthologs and Arabidopsis paralogs
From: Conservation of noncoding microsatellites in plants: implication for gene regulation
CNMSs | Orthologs | Orthologs | Function description | ||
|---|---|---|---|---|---|
| Â | Arabidopsis | Brassica | Arabidopsis | Brassica | Â |
(GA)n | At2g16780 | BOMMT72TR | At4g35050 | Â | WD-40 repeat protein |
(GA)n | At4g25620 | gn1ltil104045340 | At5g52430 | Â | hydroxyproline-rich glycoprotein protein |
(GAA)n | Atlg12420 | BONGX39TF | At4g22780 | Â | ACT domain protein |
(GAA)n | At4g29000 | BOHVH87TR | At2g20110 | Â | TSO1-like CXC domain protein |
(CT)n | Atlg07870 | BONGE63TR | At2g28590 | BONRT22TR | protein kinase |
(CT)n | Atlg14870 | BONHS20TF | At5g35525 | Â | unknown |
(CT)n | Atlg68360 | BOIHI85TR | Atlg67030 | Â | zinc finger |
(CT)n | Atlg77660 | BOOAX17TF | Atlg21920 | Â | phosphatidylinositol-4-phos phate 5-kinase-related |
(CT)n | At2g28890 | BOHQE28TR | Atlg07630 | Â | protein phosphatase 2C |
(CT)n | At2g45050 | BONAX55TR | At3g60530 | Â | zinc finger |
(CT)n | At2g47440 | BOHWG09TF | At3g62570 | Â | heat shock protein |
(CT)n | At3g06760 | BOICE92TR | At5g49230 | Â | drought-responsive protein |
(CT)n | At2g47485 | BOIFI37TR | At3g62650 | Â | unknown |
(CT)n | At3g22270 | BOGAX66TF | At4g14990 | Â | unknown |
(CT)n | At4g34720 | BOHJQ57TF | At2g16510 | Â | vacuolar ATP synthase |
(CT)n | At5g01240 | BOHGK06TF | At2g38120 | Â | amino acid permease |
(CT)n | At5g11930 | BOHPT64TF | At4g33040 | Â | glutaredoxin protein |
(CTT)n | At5g27430 | gn1ltil103985703 | At3g05230 | Â | signal peptidase subunit |