Gene | F1 | R1 | Known AS Event2 | Confidence3 | Preferential Inclusion of Splice Variants4 | FC5 |
---|---|---|---|---|---|---|
ACTN1 | Ex18 | Ex20 | 19a/19b are MEEs | Good | Ex19a in Tumor, 19b in Normal | -1.05 |
ATP2B4 | Ex20 | Ex22 | Ex21 is CE | Good | Ex21 in Normal | +1.53 |
VCL | Ex18 | Ex20 | Ex19 is CE | Good | Ex19 in Normal | +1.22 |
CALD1 | Ex5 | Ex7 | extended Ex5; Ex6 is CE | Good | extended Ex5 + Ex6 in Normal; Ex6 in Normal | +1.36 |
SLC3A2 | Ex1 | Ex5 | Ex2, 3, 4 are CEs | Good | Normal skips all exons | -1.90 |
COL6A3 | Ex2 | Ex5 | Ex3 and Ex4 are CEs | Good | Ex3 or Ex4 in Tumor | -1.56 |
COL6A3 | Ex5 | Ex7 | Ex6 is CE | Good | Ex6 in Tumor | -1.56 |
CTTN | Ex10 | Ex14 | Ex11 is CE | Good | Ex11 in Tumor | -1.21 |
FN1 | Ex24 | Ex26 | Ex25 is CE | Good | Ex 25 in Normal | -1.86 |
TPM1 | Ex6 Ex6 | Ex7 Ex8 | Ex7/Ex8 are usually MEEs | Good | Ex7 in Tumor; Ex8 in Normal | +1.92 |
GK | Ex19 | Ex21 | Ex20 is CE | Mod. | Ex20 in Tumor | -1.01 |
MAST2 | Ex7 Ex5 | Ex9 Ex9 | Ex7 alt. start? | Mod. | Ex7 Alt. Start in Normal | +1.26 |
LGR5 | Ex10 Ex11b | Ex12 Ex12 | extended Ex11; Ex11b is CE | Weak | extended Ex11 + Ex11b in Tumor | -12.1 |
ZAK | Ex11 | Ex11b | Ex11 Alt. 3' end | Weak | Alt. 3' end (Ex11b) in Normal | -1.07 |
ZAK | Ex16 | Ex18 | Ex17 appears constitutive | Weak | different 3' end of gene | -1.07 |
FXYD6 | Ex1 | Ex4 | Ex2 and Ex3 are rare CEs | Very Weak | Ex2 + Ex3 in Tumor | +2.50 |