Table 4 Classification of Atlantic halibut unique sequences according to COG
Category | # | % |
|---|---|---|
Amino acid transport and metabolism | 72 | 6.05 |
Carbohydrate transport and metabolism | 61 | 5.12 |
Coenzyme transport and metabolism | 22 | 1.85 |
Inorganic ion transport and metabolism | 27 | 2.27 |
Lipid transport and metabolism | 42 | 3.53 |
Nucleotide transport and metabolism | 43 | 3.61 |
Secondary metabolites biosynthesis, transport and catabolism | 13 | 1.09 |
Energy production and conversion | 128 | 10.75 |
   Total metabolism and energy | 408 | 34.26 |
Cell cycle control, cell division, chromosome partitioning | 10 | 0.84 |
Chromatin structure and dynamics | 14 | 1.18 |
Replication, recombination and repair | 41 | 3.44 |
RNA processing and modification | 6 | 0.50 |
Transcription | 51 | 4.28 |
Translation, ribosomal structure and biogenesis | 188 | 15.79 |
Posttranslational modification, protein turnover, chaperones | 211 | 17.72 |
   Total nucleic acid processes | 521 | 43.74 |
Cell wall/membrane/envelope biogenesis | 6 | 2.14 |
Cytoskeleton | 40 | 3.36 |
   Total cell structure | 46 | 3.86 |
Intracellular trafficking, secretion, and vesicular transport | 37 | 3.11 |
Signal transduction mechanisms | 33 | 2.77 |
Defense mechanisms | 4 | 0.34 |
General function prediction only | 132 | 11.08 |
Function unknown | 10 | 0.84 |
   Total | 1191 | 100.00 |