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Table 1 Mean microsatellite frequency, repeat count, and polymorphism by motif length

From: Patterned sequence in the transcriptome of vascular plants

Mismatches

Type

Motif length

     
  

1

2

3

4

5

6

0

simpfreq

13.574

24.427

50.259

7.826

14.244

17.152

0

compfreq

67.573

114.02

230.762

517.736

203.929

144.361

0

totfreq

81.147

138.447

281.02

525.563

218.174

161.515

0

fracsimp

0.155

0.106

0.153

0.012

0.054

0.099

0

simprepe

18.701

11.593

5.786

4.39

3.227

3.161

0

comprepe

10.287

5.018

3.363

2.038

2.034

2.066

0

simppoly

0.092

0.135

0.167

0.174

0.151

0.185

0

comppoly

0.095

0.112

0.141

0.113

0.121

0.144

1

simpfreq

23.588

27.15

79.092

16.725

33.478

19.782

1

compfreq

132.425

135.595

268.245

146.506

3001.555

1474.271

1

totfreq

156.013

162.745

347.337

163.232

3035.033

1494.054

1

fracsimp

0.141

0.124

0.223

0.1

0.009

0.011

1

simprepe

18.417

10.901

5.759

4.248

3.122

3.147

1

comprepe

12.317

6.526

4.533

3.134

2.007

2.018

1

simppoly

0.102

0.126

0.159

0.165

0.147

0.185

1

comppoly

0.112

0.125

0.157

0.125

0.128

0.138

2

simpfreq

16.906

34.942

45.113

11.936

17.453

20.905

2

compfreq

2.928

5.148

5.326

1.259

1.796

3.169

2

totfreq

19.834

40.091

50.439

13.195

19.249

24.074

2

fracsimp

0.879

0.832

0.903

0.919

0.93

0.879

2

simprepe

24.525

13.555

8.206

5.495

4.297

4.213

2

comprepe

27.141

15.596

8.785

5.695

4.172

3.728

2

simppoly

0.086

0.145

0.169

0.181

0.176

0.205

2

comppoly

0.093

0.167

0.199

0.184

0.191

0.159