Table 2 G. metallireducens genes for which transcription was induced at least 10-fold with benzoate as the sole electron and carbon donor, relative to acetate
Gmet ORFa | Fold change | Gene name | Predicted function |
|---|---|---|---|
Gmet_0108 | 12.9 | Â | ATPase |
Gmet_0356 | 13.8 | Â | Conserved hypothetical protein |
Gmet_0519 | 20 | Â | Permease |
Gmet_0728 | 16.5 | Â | Conserved hypothetical protein |
Gmet_1802 | 23.6 | Â | Aldehyde ferredoxin oxidoreductase |
Gmet_1803 | 15.7 | Â | 4Fe-4S binding |
Gmet_2017 | 31.5 | Â | Hypothetical protein |
Gmet_2057 | 31.9 | ech^ | Enoyl-CoA hydratase/isomerase |
Gmet_2058 | 15.2 | act* | Thiolase |
Gmet_2059 | 16.4 | adh | Short-chain dehydrogenase |
Gmet_2064 | 13.2 | tre^ | Bacterial regulatory proteins, IclR |
Gmet_2065 | 28.7 | oxr | 4Fe-4S binding |
Gmet_2068 | 32.6 | scsA* | Succinyl-CoA synthetase, alpha |
Gmet_2071 | 14.1 | ech* | Enoyl-CoA hydratase/isomerase |
Gmet_2072 | 18.4 | acd^ | 3-hydroxyacyl-CoA dehydrogenase |
Gmet_2074 | 50.7 | bamN^ | Thiolase |
Gmet_2075 | 19.1 | bamM* | Acyl-CoA dehydrogenase |
Gmet_2077 | 21.8 | bamK | N-acetyltransferase |
Gmet_2080 | 36.1 | bamH^ | NAD(P) diaphorase, HoxF |
Gmet_2081 | 27.5 | bamG | NAD(P) diaphorase, HoxU |
Gmet_2083 | 27.3 | bamF^ | hydrogenase, delta subunit; HTH mo |
Gmet_2084 | 20.6 | bamE* | 4Fe-4S binding, FAD binding |
Gmet_2085 | 27 | bamD^ | 4Fe-4S binding, cysteine rich |
Gmet_2086 | 20 | bamC* | 4Fe-4S binding |
Gmet_2087 | 36.4 | bamB* | Aldehyde ferredoxin oxidoreductase |
Gmet_2147 | 10.4 | bamU^ | Amidohydrolase |
Gmet_2149 | 12.1 | bamS | Hypothetical |
Gmet_2150 | 33.4 | bamR* | Dch |
Gmet_2151 | 29.3 | bamQ* | Had |
Gmet_2152 | 28.9 | bamP* | Electron transfer flavoprotein, alpha |
Gmet_2153 | 10.2 | bamO^ | Electron transfer flavoprotein, beta |
Gmet_2157 | 12 | Â | Response regulator receiver |
Gmet_2260 | 22.4 | Â | Succinyl-CoA synthetase, alpha sub |
Gmet_3305 | 27.2 | Â | Oah2 |