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Table 2 Comparison of DNA microarray and real-time PCR measurements. Shown are the mean and the standard error of the mean for at least three independent experiments.

From: Effects of DNA-targeted ionizing radiation produced by 5-[125I]iodo-2'-deoxyuridine on global gene expression in primary human cells

  

Microarray ratio

RT-PCR ratio

Gene symbol

Cell line

Mean ± SEM

Mean ± SEM

CDKN1A

AG09319

4.17 ± 0.75

2.72 ± 0.22

 

GM05388

3.45 ± 0.48

2.99 ± 0.49

 

NHFK

1.17 ± 0.20

1.17 ± 0.22

GADD45A

AG09319

1.77 ± 0.24

1.37 ± 0.31

 

GM05388

1.57 ± 0.35

1.23 ± 0.17

 

NHFK

0.90 ± 0.15

0.79 ± 0.18

IGFBP3

AG09319

1.59 ± 0.11

1.06 ± 0.13

 

GM05388

1.15 ± 0.22

1.10 ± 0.17

 

NHFK

1.16 ± 0.06

0.74 ± 0.41

H2AFX

AG09319

0.41 ± 0.05

0.18 ± 0.06

 

GM05388

0.62 ± 0.13

0.41 ± 0.15

 

NHFK

0.80 ± 0.21

0.70 ± 0.21

FHL2

AG09319

1.79 ± 0.31

0.97 ± 0.11

 

GM05388

1.75 ± 0.46

1.15 ± 0.17

 

NHFK

1.16 ± 0.40

1.03 ± 0.27

TRIM22

AG09319

1.38 ± 0.17

1.07 ± 0.17

 

GM05388

1.95 ± 0.41

1.63 ± 0.13

 

NHFK

1.82 ± 0.54

2.22 ± 1.20