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Table 2 Expression of nitrate assimilation genes under different N conditions

From: Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis

Genes

 

Locus

Fold limiting

Fold stress

Fold 2 hr

Fold 24 hr

Nitrate transport

     

Low-affinity nitrate transporter

NRT1.1

At1g12110

1.3

1.8

1.8

-1.3

 

NRT1.2

At1g69850

-

-

-

-

 

NRT1.3

At3g21670

-1.1

-2.1

1.0

1.6

 

NRT1.4

At2g26690

-1.1

-2.1

1.2

2.4*

High-affinity nitrate transporter

NRT2.1

At1g08090

-

-

-

-

 

NRT2.2

At1g08100

-

-

-

-

 

NRT2.3

At5g60780

-

-

-

-

 

NRT2.4

At5g60770

-

-

-

-

 

NRT2.5

At1g12940

-

-

-

-

 

NRT2.6

At3g45060

-

-

-

-

 

NRT2.7

At5g14570

-

-

-

-

Nitrate reduction

     

Nitrate reductase 1 (NR1)

 

At1g77760

-1.2

-1.9

11.1*

1.5

Nitrate reductase 2 (NR2)

 

At1g37130

-1.2

-3.3*

8.1*

2.9*

Nitrite reductase (NiR)

 

At2g15620

-1.2

-4.4*

15.1*

3.2*

urophorphyrin III methylase (UPM1)

 

At5g40850

1.0

-1.5

10.1*

1.5

Fd NADP (+) reductase (FNR)

 

At4g05390

1.3

1.2

3.6*

1.0

  

At1g30510

1.1

1.1

3.1*

1.0

  

At4g32360

-

-

-

-

  

At5g66190

-

-

-

-

  

At1g20020

-

-

-

-

  

At5g66810

-

-

-

-

Ammonia assimilation

     

Glutamine synthetase

GS1-1

At5g37600

1.7

4.7*

-1.6

-3.4*

 

GS1-2

At1g66200

-

-

-

-

 

GS1-3

At3g17820

-

-

-

-

 

GS1-4

At5g16570

1.7

6.9*

-2.0

-3.7*

 

GS1-5

At1g48470

-

-

-

-

Glutamate synthetase

GS2

At5g35630

-

-

-

-

 

GOGAT1

At5g04140

-

-

-

-

 

GOGAT2

At2g41220

-

-

-

-

 

GOGAT3

At5g53460

-

-

-

-

Asparagines synthetase

AS1

At3g47340

-

-

-

-

 

AS2

At5g65010

-1.3

-3.2*

7.6*

2.9*

 

AS3

At5g10240

-

-

-

-

  1. Fold changes under different N conditions were presented: sufficient N vs. limiting N (fold, limiting); sufficient N vs. stress N (fold, stress); stress N vs. 2 hr induction (fold, 2 hr); stress N vs. 24 hr induction (fold, 24 hr). Negative number means gene expression down-regulated in said condition, and positive number means gene expression up-regulated in said condition. *significant from our SAM analysis;
  2. ---- no fluctuation under all N conditions