Table 3 Gene Ontology mappings (using GO slim terms) for Dictyocaulus viviparus clusters. Note that individual GO categories can have multiple mappings
From: A transcriptomic analysis of the adult stage of the bovine lungworm, Dictyocaulus viviparus
Categories and subcategories | Representation | % Representation of total |
|---|---|---|
a. Biological Process | 540 | 8.53 |
cellular process | 277 | 4.38 |
   cell communication | 56 | 0.88 |
   cell recognition | 1 | 0.02 |
   cell differentiation | 33 | 0.52 |
response to stimulus | 146 | 2.31 |
   response to biotic stimulus | 11 | 0.17 |
   response to abiotic stimulus | 30 | 0.47 |
   response to stress | 35 | 0.55 |
   behavior | 114 | 1.8 |
reproduction | 180 | 2.84 |
growth | 180 | 2.84 |
physiological process | 424 | 6.7 |
   response to endogenous stimulus | 10 | 0.16 |
   response to external stimulus | 16 | 0.25 |
   response to stress | 35 | 0.55 |
   death | 35 | 0.55 |
   metabolism | 256 | 4.05 |
   homeostasis | 5 | 0.08 |
development | 284 | 4.49 |
   embryonic development | 228 | 3.6 |
anatomical structure development | 103 | 1.63 |
localization | 54 | 0.85 |
b. Cellular component | 328 | 5.18 |
cell | 311 | 4.91 |
   intracellular | 264 | 4.18 |
organelle | 215 | 3.4 |
   vesicle | 9 | 0.04 |
   membrane-bound organelle | 152 | 2.4 |
organelle envelope | 1 | 0.02 |
   non-membrane-bound organelle | 86 | 1.36 |
organelle part | 21 | 0.33 |
   organelle lumen | 18 | 0.28 |
envelope | 1 | 0.02 |
protein complex | 22 | 0.35 |
   unlocalized protein complex | 5 | 0.08 |
cell part | 280 | 4.42 |
extracellular matrix (sensu Metazoa) | 10 | 0.16 |
extracellular region | 17 | 0.27 |
extracellular region part | 15 | 0.24 |
   extracellular space | 5 | 0.08 |
c. Molecular function | 457 | 7.22 |
binding | 253 | 4 |
   carbohydrate binding | 4 | 0.06 |
   ion binding | 13 | 0.21 |
   nucleotide binding | 65 | 1.03 |
   nucleic acid binding | 80 | 1.26 |
   chromatin binding | 2 | 0.03 |
   lipid binding | 3 | 0.05 |
   protein binding | 107 | 1.69 |
antioxidant activity | 2 | 0.03 |
catalytic activity | 214 | 3.38 |
hydrolase activity | 90 | 1.42 |
transferase activity | 51 | 0.81 |
enzyme regulator activity | 11 | 0.17 |
electron transporter activity | 10 | 0.16 |
motor activity | 1 | 0.02 |
signal transducer activity | 12 | 0.19 |
   receptor activity | 4 | 0.06 |
structural molecule activity | 214 | 1.69 |
transcription regulator activity | 68 | 1.07 |
transporter activity | 28 | 0.44 |
   ion transporter activity | 1 | 0.02 |
   channel or pore class transporter activity | 1 | 0.02 |
translation regulator activity | 8 | 0.13 |