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Table 3 List of genes deleted in DIG15

From: Comparative genomic analysis of Tropheryma whipplei strains reveals that diversity among clinical isolates is mainly related to the WiSP proteins

Gene ID

Gene name

CGH

Sequencing

TWT607

WiSP family protein

+1

present

TWT608

WND-domain containing, WiSP family protein

0

deleted

TWT609

miaA; tRNA isopentenylpyrophosphate transferase

0

deleted

TWT610

hypothetical protein

0

deleted

TWT611

recA; recombinase A

0

deleted

TWT612

pgsA; CDP-diacylglycerol – glycerol-3-phosphate 3-phosphatidyltransferase

0

deleted

TWT613

hypothetical protein

-1

deleted

TWT614

ftsK; cell division protein FtsK

-1

deleted

TWT615

hypothetical protein

-1

deleted

TWT616

thyX; thymidylate synthase

0

deleted

TWT617

hypothetical protein

-1

deleted

TWT618

wblE; putative transcription regulatory protein

-1

deleted

TWT619

ORFan

-1

deleted

TWT620

hypothetical protein

0

deleted

TWT621

hypothetical protein

-1

deleted

TWT622

rph; ribonuclease PH

0

deleted

TWT623

hypothetical protein

0

deleted

TWT624

WND-domain containing, WiSP family protein

-1

deleted

TWT625

putative serine protease

+1

present

  1. (+1): present; (0): uncertain; (-1): absent