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Table 2 Genomic location and orientation of yfr1 in cyanobacteria

From: A motif-based search in bacterial genomes identifies the ortholog of the small RNA Yfr1 in all lineages of cyanobacteria

Organism

Orientation

all Prochlorococcus (8 strains)

guaB

yfr1

trxA

all marine Synechococcus (9 strains)

guaB

yfr1

trxA

Thermosyn. elongatus

tlr1779*→

yfr1

←tll1780*

Gloeobacter violaceu s

trpE

yfr1

trxA

Synechococcus Bprime

ligA

yfr1

clpX

Synechococcus Aprime

ligA

yfr1

clpX

Synechococcus PCC7942/6301

guaB

yfr1

trxA

Crocosphaera watsonii WH 8501

pcrA

yfr1

trxA

Synechocystis PCC 6803

←sll0586*

yfr1

trxA

Trichodesmium eryt. IMS101

guaB

yfr1

←Tery3307*

Lyngbya PCC7419

guaB

yfr1

trxA

Anabaena variabilis ATCC 29413

guaB

yfr1

trxA

Anabaena PCC7120

guaB

yfr1

trxA

Nostoc punctiforme PCC73102

guaB

yfr1

trxA

Nodularia PCC9350

guaB

yfr1

trxA

  1. See Fig. 2 for the strain names of marine Synechococcus and Prochlorococcus;*hypothetical protein.