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Table 4 List of transcripts that predominate in different oil palm tissues

From: Analysis and functional annotation of expressed sequence tags (ESTs) from multiple tissues of oil palm (Elaeis guineensis Jacq.)

Putative identity

No of ESTs

Species

Accession number

E-value

Root

    

Type 2 metallothionein-like protein

93

Typha latifolia

gb|AAL09705.1

9E-10

Sucrose synthase

21

Oncidium cv. 'Goldiana'

gb|AAM95943.1

0.0

Putative translation initiation factor eIF-1A-like

21

Solanum tuberosum

gb|ABB55392.1

4E-51

Putative OsCTTP

17

Oryza sativa

ref|XP_465531.1

3E-84

OSJNBa0006M15.20

17

Oryza sativa

ref|XP_472724.1

2E-45

Cyclophilin

16

Ricinus communis

emb|CAC80550.1

2E-77

Cytochrome b5 domain-containing protein-like

15

Oryza sativa

ref|XP_468235.1

4E-16

PVR3-like protein

14

Ananas comosus

gb|AAM28295.1

6E-18

Putative ubiquitin-conjugating enzyme

11

Oryza sativa

dbj|BAD34325.1

3E-79

Shoot apical meristem

    

rRNA intron-encoded homing endonuclease

16

Pan troglodytes

ref|XP_525925.1|

8E-07

DnaJ-like protein

15

Oryza sativa

emb|CAC39071.1

E-178

Hypothetical protein CBG17156

14

Caenorhabditis briggsae

emb|CAE70527.1

0.13

Putative fiber protein Fb2

10

Oryza sativa

ref|XP_465147.1

1E-56

Ethylene response factor

9

Manihot esculenta

gb|AAX84670.1

9E-73

Hypothetical protein FG07171.1

9

Gibberella zeae PH-1

gb|EAA76630.1

6.8

Type 2 metallothionein-like protein

9

Typha latifolia

gb|AAL09705.1

2E-20

Annexin p33

9

Zea mays

emb|CAA66900.2

E-116

Alpha-tubulin

9

Prunus dulcis

emb|CAA47635.1

E-124

Glycine-rich RNA binding protein 2

8

Pelargonium × hortorum

gb|AAB63582.1

4E-36

PVR3-like protein

8

Ananas comosus

gb|AAM28295.1

8E-18

Drought-induced protein like

8

Arabidopsis thaliana

emb|CAB10370.1

4E-10

Young flowers

    

Cytoplasmic ribosomal protein S15a

45

Daucus carota

gb|AAK30203.1

4E-67

Glycine-rich RNA binding protein 2

22

Pelargonium × hortorum

gb|AAB63582.1

5E-36

Putative OsCTTP

21

Oryza sativa

ref|XP_465531.1

3E-84

Putative translation initiation factor eIF-1A-like

17

Solanum tuberosum

gb|ABB55392.1

4E-51

Translationally controlled tumor protein

14

Elaeis guineensis

gb|AAQ87663.1

3E-88

Putative STF-1

12

Oryza sativa

dbj|BAD31135.1

9E-67

Type 2 metallothionein-like protein

12

Typha latifolia

gb|AAL09705.1

6E-11

Ribosomal protein L15

11

Oryza sativa

ref|NP_909841.1

8E-92

Polyphenol oxidase

11

Vitis vinifera

emb|CAA81798.1

E-105

Cyclophilin

11

Ricinus communis

emb|CAC80550.1

2E-77

Mature flower

    

Type 2 metallothionein-like protein

60

Typha latifolia

gb|AAL09705.1

8E-11

Alpha-tubulin

30

Prunus dulcis

emb|CAA47635.1

0.0

Putative translation elongation factor eEF-1 beta' chain

24

Oryza sativa

ref|NP_910927.2

5E-64

Glycine-rich RNA binding protein 2

20

Pelargonium × hortorum

gb|AAB63582.1

4E-36

Putative translation initiation factor eIF-1A-like

18

Solanum tuberosum

gb|ABB55392.1

4E-51

Similar to mucin 17

17

Rattus norvegicus

ref|XP_578244.1

0.004

OSJNBa0006M15.20

15

Oryza sativa

ref|XP_472724.1

2E-45

Cationic peroxidase 2

10

Glycine max

gb|AAC83463.1

E-155

Suspension cell culture

    

Lipid transfer protein homolog

21

Triticum aestivum

gb|AAB32995.1

3E-25

Cationic peroxidase 2

12

Glycine max

gb|AAC83463.1

E-153

Glyceraldehyde 3-phosphate dehydrogenase

12

Magnolia quinquepeta

emb|CAA42905.1

E-174

Hypothetical protein

10

Oryza sativa

dbj|BAD87021.1

7E-27

Ubiquitin

10

Antirrhinum majus

emb|CAA48140.1

E-121

Non-symbiotic hemoglobin class 1

9

Malus × domestica

gb|AAP57676.1

2E-67

Putative beta-expansin

9

Triticum aestivum

dbj|BAD06319.1

2E-72

TAPETUM DETERMINANT 1

9

Arabidopsis thaliana

ref|NP_974612.1

4E-32

1-Aminocyclopropane-1-carboxylic acid oxidase

9

Elaeis guineensis

gb|AAP13098.1

E-168

Thaumatin-like protein precursor

7

Malus × domestica

gb|AAC36740.1

2E-82

Zygotic embryo

    

Early-methionine-labelled polypeptide

46

Secale cereale

emb|CAB88095.1

2E-35

7S globulin

21

Elaeis guineensis

gb|AAK28402.1

0.0

Dehydrin-like protein

10

Elaeis guineensis

gb|AAF60172.1

1E-26

Late embryogenesis abundant protein D-34

9

Gossypium hirsutum

sp|P09444

4E-76

Protein, small heat shock

6

Codonopsis lanceolata

gb|AAW02791.1

1E-23

Seed maturation protein LEA 4

4

Glycine tomentella

gb|AAG37452.1

6E-24

Translationally controlled tumor protein

4

Elaeis guineensis

gb|AAQ87663.1

3E-88

Ribosomal protein S27-like protein

4

Solanum tuberosum

gb|ABA40465.1

8E-35

Class II metallothionein

4

Zea mays

emb|CAA84233.1

5E-17

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BMC Genomics

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