Table 3 TFBS over-represented in kinetic waves induced by LPS
From: Functional genomic delineation of TLR-induced transcriptional networks
Kinetics set | Enriched TFBS motifs | Dataset | # of genes | p-value |
|---|---|---|---|---|
EE | ATF/CREB (M00177) | MmBMM | 81 | 1.0·10-8 |
|  |  | MmRAW | 100 | 1.1·10-5 |
|  | SRF (M00810) | MmRAW | 100 | 4.1·10-6 |
ED | NF-κB (M00053) | MmBMM | 213 | 2.3·10-7 |
|  |  | MmRAW | 133 | 2.9·10-6 |
DD | ISRE (M00258) | MmBMM | 1425 | 1.7·10-17 |
|  |  | MmRAW | 1006 | 8.4·10-11 |
|  | ETS (M00971) | MmBMM | 1425 | 1.9·10-8 |