Table 3 Integration age and recombination event of putative MuERVs.
Virus | LTR (bp) | Mutation rate (%) | Integration age (MYr*) | Direct repeat | Recombination | Virus | LTR (bp) | Mutation rate (%) | Integration age (MYr*) | Direct repeat | Recombination |
|---|---|---|---|---|---|---|---|---|---|---|---|
L-1-1.4 | 487 | 0 | • | CCTT | no | K-3-5.13 | 547 | 0 | • | GTAC | no |
L-1-1.8 | 487 | 0 | • | ATAT | no | K-3-6.4 | 741 | 0.1349 | 1.037 | CAGG | no |
L-1-2.8a | 573 | ND | ND | GGTC/GTCT | yes | K-3-6.5 | 741 | 0 | • | ATAC | no |
L-1-2.8b | 574 | 0 | • | GTAT | no | K-3-6.6 | 741 | ND | ND | ACAA/ACAC | yes |
L-1-2.9 | 574 | ND | ND | GGAA/GGGG | yes | K-3-6.7 | 741 | 0 | • | CCTG | no |
L-1-2.14 | 574 | 0.1742 | 1.34 | GTAT | no | K-3-6.8 | 741 | ND | ND | GGAA/GGTG | yes |
L-1-2.19 | 574 | 0 | • | CTTG | no | K-3-6.12 | 741 | 0 | • | AGAC | no |
L-3-2.4 | 547 | 0 | • | AACA | no | K-4-11.1a | 698 | 0 | • | CAAG | no |
L-3-9.5 | 533 | 0 | • | CTGG | no | K-4-11.1b | 697 | 0 | • | GTTG | no |
U-1-5.5a | 697 | 0 | • | CCAC | no | K-4-11.2 | 697 | 0 | • | GTGT | no |
U-1-5.5b | 697 | 0 | • | CACC | no | K-4-11.4a | 697 | 0.1434 | 1.103 | CACC | no |
U-1-5.15 | 697 | 0 | • | AAACAAACAAAC | no | K-4-11.4b | 698 | 0.1432 | 1.101 | AAAC | no |
U-1-5.16 | 697 | 0 | • | CTGG | no | K-4-11.7a | 697 | 0.2869 | 2.206 | ATGA | no |
U-1-5.X | 697 | 0 | • | ATAC | no | K-4-11.7b | 697 | 0 | • | ATTT | no |
U-1-7.1 | 748 | 0.2673 | 2.056 | ACAC | no | K-4-11.7c | 697 | 0 | • | CATG | no |
U-3-4.8 | 697 | 0 | • | AGGT | no | K-4-11.7d | 698 | 0 | • | CTAA | no |
K-3-3.2 | 741 | 0 | • | ATTG | no | K-4-11.10a | 697 | 0 | • | GTGC | no |
K-3-3.3a | 742 | 0 | • | ACTT | no | K-4-11.10b | 697 | 0 | • | GATG | no |
K-3-3.3b | 742 | 0 | • | ATGT | no | K-4-11.11a | 697 | 0 | • | ATAG | no |
K-3-3.4 | 741 | ND | ND | CCAA/CCTG | yes | K-4-11.11b | 697 | 0 | • | GGAG | no |
K-3-3.5a | 741 | 0 | • | GATG | no | K-4-11.12 | 697 | 0 | • | CTGT | no |
K-3-3.5b | 741 | ND | ND | ATAT/TTAT | yes | K-4-11.13 | 697 | 0 | • | GTGG | no |
K-3-3.5c | 741 | 0 | • | ATAG | no | K-4-11.19 | 697 | 0 | • | CTTC | no |
K-3-3.10a | 741 | ND | ND | ACAG/TTAG | yes | K-4-11.X | 697 | ND | ND | TGAA/GAGT | yes |
K-3-3.10b | 743 | ND | ND | CTGC/TTGC | yes | U-4-8.1 | 697 | 0 | • | TTTG | no |
K-3-3.11a | 741 | 0 | • | ACAC | no | U-4-8.5 | 697 | 0 | • | AGGG | no |
K-3-3.11b | 743 | ND | ND | AGGG/TTGG | yes | U-4-8.11 | 697 | 0 | • | GTTC | no |
K-3-3.11c | 741 | 0 | • | ACAC | no | U-4-8.18 | 697 | 0 | • | CCTG | no |
K-3-3.11d | 741 | ND | ND | AAAC/GAAA | yes | U-4-11.1 | 525 | 0 | • | AACC | no |
K-3-3.13 | 741 | 0 | • | CTAC | no |  |  |  |  |  |  |