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Table 1 Percentage of gains and losses, determined for array CGH and SNP array data.

From: Combined array-comparative genomic hybridization and single-nucleotide polymorphism-loss of heterozygosity analysis reveals complex genetic alterations in cervical cancer

 

Gains

Losses

Cell line

SNP (%)

CGH (%)

Con. (%)

SNP (%)

CGH (%)

Con. (%)

CSCC1

20.6

26.9

88.3

14.9

10.4

94.6

CSCC7

16.9

16.4

93.9

16.7

12.3

95.4

CC8

35.7

30.2

88.6

12.5

11.3

89.6

CC10A

10.3

23.5

86.9

19.7

8.2

83.4

CC10B

15.9

11.2

94.4

21.7

17.4

95.4

CC11-

16.4

13.9

92.9

2.4

1.8

99.3

CC11+

11.0

14.5

93.9

3.5

1.8

98.3

CasKi

20.7

30.5

87.6

22.6

13.8

91.1

SiHa

12.6

13.7

92.7

23.1

20.9

94.1

HeLa

30.3

24.0

86.2

5.4

3.9

98.2

Average

19.0

20.5

90.5

14.3

10.2

93.9

  1. The percentage of concordance between both techniques is shown in the latter column of gains and losses. Abbreviations: Con. is concordance.