Table 4 Ontologies of the genes exhibiting differential mRNA abundance in eggs of varying quality identified from the microarray analysis.
From: Microarray-based analysis of fish egg quality after natural or controlled ovulation
Symbol | Biological Process (P) | Cellular component (C) | Molecular Function (F) |
|---|---|---|---|
AGM1 | glucosamine metabolism | Â | phosphoacetylglucosamine mutase activity |
APOB | circulation lipid transport signal transduction | extracellular region endoplasmic reticulum microsome | lipid transport activity receptor binding |
BMP7 | BMP signalling pathway cell development organ morphogenesis mesoderm formation pattern specification positive regulation of cell differentiation | Extracellular space | cytokine activity protein binding |
CUL5 | cell cycle arrest cell proliferation G1/S transition of mitotic cell cycle induction of apoptosis by intracellular signals negative regulation of cell proliferation regulation of progression through cell cycle | Â | calcium channel activity protein binding receptor activity |
DCPS | mRNA catabolism | Â | pyrophosphatase activity |
FGD5 | cytoskeleton organization and biogenesis regulation of cell shape | cytoplasm Golgi apparatus | protein binding small GTPase binding |
GMCL1 | nuclear membrane organization and biogenesis regulation of transcription spermatogenesis | nuclear lamina nuclear matrix | protein binding |
GTF2B | mRNA transcription from RNA polymerase II promoter transcription initiation from RNA polymerase II promoter | transcription factor complex | general RNA polymerase II transcription factor activity protein binding RNA polymerase II transcription factor activity |
HCFC1 | positive regulation of progression through cell cycle regulation of transcription transcription from RNA polymerase II promoter | cytoplasm nucleus | identical protein binding transcription coactivator activity transcription factor activity |
KHK | carbohydrate catabolism | Â | ketohexokinase activity |
KIF4A | organelle organization and biogenesis anterograde axon cargo transport | cytoplasm spindle microtubules | microtubule motor activity |
LAMB2 | synaptic transmission electron transport | basal lamina membrane | calcium ion binding oxidoreductase activity phospholipase A2 activity structural molecule activity |
MCF2L | Rho protein signal transduction | membrane lamellipodium | phosphatidylinositol binding Rho guanyl-nucleotide exchange factor activity |
NEK1 | response to DNA damage stimulus response to ionizing radiation | cytoplasm nucleus | protein binding protein kinase activity |
PDCL3 | phototransduction | cytoplasm | protein binding |
PDGFRA | cell proliferation extracellular matrix organization and biogenesis male genitalia development morphogenesis | integral to plasma membrane | platelet-derived growth factor binding protein dimerization activity protein serine/threonine kinase activity |
PHB2 | signal transduction negative regulation of transcription | mitochondrial inner membrane nucleus | estrogen receptor binding protein binding specific transcriptional repressor activity |
RAB3IP | Â | cytoplasm nucleus | protein Binding GTPase binding |
TGFBR2 | regulation of cell proliferation Cell fate commitment protein amino acid phosphorylation protein amino acid dephosphorylation | integral to membrane | ATP binding protein binding protein tyrosine kinase activity |
TLE1 | signal transduction regulation of transcription, DnA-dependent organ morphogenesis | nucleus | Â |
VWF | cell adhesion response to wounding | extracellular space | protease binding protein binding |