Table 2 REGs identified from Arabidopsis hexamer analysis
From: Identification of plant promoter constituents by analysis of local distribution of short sequences
Sequence | Peak position (bp) | Peak width (bp) | #promoter | Relative Peak Height (RPH) | Relative Peak Area (RPA) |
|---|---|---|---|---|---|
AGGCCC | -76 | 326 | 2,005 | 14.78 | 0.54 |
GGCCCA | -73 | 347 | 1,225 | 12.26 | 0.53 |
GGGCCT | -106 | 240 | 1,764 | 10.31 | 0.47 |
TGGGCC | -107 | 262 | 2,867 | 9.29 | 0.46 |
GGGCCC | -91 | 256 | 711 | 9.51 | 0.44 |
GCCCAT | -76 | 320 | 2,925 | 8.41 | 0.43 |
GCCCAA | -72 | 366 | 3,068 | 7.78 | 0.42 |
AGCCCA | -85 | 284 | 2,963 | 7.53 | 0.39 |
CACGTG | -80 | 273 | 3,039 | 6.85 | 0.38 |
AAGCCC | -86 | 299 | 2,593 | 7.48 | 0.37 |
CGGCCC | -62 | 189 | 732 | 7.66 | 0.36 |
CCACGT | -83 | 260 | 2,367 | 5.66 | 0.35 |
ATGGGC | -97 | 295 | 2,836 | 6.29 | 0.35 |
CGTGGC | -97 | 251 | 1,459 | 5.96 | 0.35 |
TAGGCC | -75 | 311 | 1,435 | 6.18 | 0.34 |
CGTGTC | -79 | 289 | 1,909 | 5.57 | 0.33 |
AAGGCC | -77 | 287 | 1,935 | 6.27 | 0.33 |
GCGCGT | -59 | 244 | 632 | 5.56 | 0.32 |
GCCACG | -83 | 215 | 1,411 | 6.64 | 0.31 |
ACGCGC | -65 | 190 | 655 | 5.08 | 0.31 |
GGGCCG | -85 | 196 | 711 | 6.01 | 0.30 |
CACGCG | -138 | 182 | 884 | 5.22 | 0.30 |