S.N. | Clone ID | Accession Numbers | Relative expression in different tissues (in folds) | Relative expression in spermatozoa from four buffaloes | Copy number status per haploid genome | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  | Testis | Ovary | Spleen | Liver | Lung | Kidney | Heart | SP1 | SP2 | SP3 | SP4 |  |  |
A. For transcripts tagged with GACA repeat motif | In blood | In germline | |||||||||||||
1. | pJC40 | DQ494483 | 194 | 21 | 23 | 17 | 2 | Cb | 3 | 274 | 181 | 147 | 239 | Â | Â |
2. | pJC42 | DQ494485 | 32 | 8 | 2 | 30 | 7 | 51 | Cb | 29 | 17 | 21 | 27 | 2–3 | 2–3 |
3. | pJC52 | DQ534910 | 512 | 32 | 34 | 83 | 24 | 60 | Cb | 6 | 9 | 5 | 7 | 3 | 3 |
4. | pJC54 | DQ834345 | 208 | 28 | 15 | 69 | 3 | Cb | 1 | 107 | 119 | 97 | 157 | 1 | 1 |
5. | pJC29 | DQ289479 | 15 | 10 | 13 | 45 | Cb | 20 | 22 | 49 | 52 | 32 | 45 | 1 | 1 |
6. | pJC35 | DQ304116 | 147 | 24 | 51 | 45 | 3 | Cb | 3 | 39 | 32 | 51 | 39 | 1–2 | 1–2 |
7. | pJC44 | DQ534902 | 44 | 21 | 17 | 34 | 11 | 25 | Cb | 97 | 111 | 97 | 128 | 1 | 1 |
8. | pJC46 | DQ534904 | 7 | 6 | 2 | 18 | 3 | Cb | 3 | 14 | 22 | 11 | 12 | 2 | 2 |
9. | pJC47 | DQ534905 | 34 | 11 | 14 | 91 | Cb | 14 | 2 | 73 | 97 | 87 | 84 | 1 | 1 |
10. | pJC49 | DQ534907 | 3521 | 891 | 330 | 637 | 238 | Cb | 630 | 2896 | 4792 | 2702 | 3326 | 1 | 1 |
11. | pJC51 | DQ534909 | 1663 | 157 | 338 | 2521 | 3 | 5 | Cb | 362 | 239 | 512 | 676 | 1 | 1 |
12. | pJC53 | DQ834344 | 17 | 13 | 5 | 29 | 4 | Cb | 45 | 18 | 14 | 12 | 16 | 2 | 2 |
13. | pJSC11 | DQ845144 | 4390 | 1176 | 664 | 1097 | Cb | 2 | 1195 | 6616 | 5120 | 8526 | 7342 | 25–65 | 30–65 |
14. | pJSC1 | DQ789045 | 46 | 35 | 40 | 36 | 12 | 15 | Cb | 36 | 21 | 23 | 27 | 1 | 1 |
16. | pJSC3 | DQ789047 | 156 | 45 | 12 | 87 | Cb | 2 | 37 | 1176 | 724 | 776 | 1440 | 1 | 1 |
17. | pJSC4 | DQ789048 | 149 | 222 | 376 | 34 | Cb | 10 | 6 | 675 | 630 | 608 | 588 | 2 | 2 |
18. | pJSC5 | DQ789049 | 128 | 2 | 2 | 9 | 2 | Cb | 2 | 62 | 47 | 41 | 38 | 2 | 2 |
19. | pJSC6 | DQ834346 | 31 | 21 | 30 | 14 | Cb | 13 | 51 | 52 | 97 | 84 | 55 | 1 | 1 |
20. | pJSC9 | DQ845142 | 53 | 4 | 3 | 4 | 3 | Cb | 3 | 15 | 14 | 15 | 14 | 2 | 2 |
21. | pJSC10 | DQ845143 | 3 | 3 | 12 | 4 | Cb | 14 | 3 | 6 | 4 | 9 | 3 | 3 | 3 |
22. | pJSC12 | DQ845145 | 91 | 6 | 28 | 52 | 2 | 6 | Cb | 138 | 97 | 119 | 97 | 1 | 1 |
23. | pJSC13 | DQ845146 | 228 | 181 | 246 | 34 | 2 | 74 | Cb | 1782 | 1910 | 1097 | 1351 | 1 | 1 |
24. | pJSC15 | DQ904037 | 39 | 4 | 26 | 13 | Cb | 5 | 2 | 49 | 35 | 45 | 39 | 8–13 | 8–10 |
25. | pJSC16 | DQ904038 | 31 | Cb | 14 | 9 | 2 | 2 | 1 | 117 | 112 | 127 | 118 | 1 | 1 |
26. | pJSC17 | DQ904039 | 27 | 22 | 19 | 15 | 9 | 16 | Cb | 14 | 29 | 18 | 20 | 1 | 1 |
27. | pJSC18 | DQ913640 | 18 | 7 | 42 | 28 | Cb | 9 | 2 | 34 | 23 | 42 | 23 | 1 | 1 |
28. | pJSC19 | DQ913641 | 85 | 24 | 35 | 28 | 2 | 13 | Cb | 69 | 68 | 83 | 52 | 2 | 2 |
29. | pJSC20 | DQ913642 | 89 | 74 | 88 | 81 | Cb | 65 | 74 | 81 | 88 | 71 | 82 | 1 | 1 |
30. | pJSC22 | DQ913644 | Cb | 4 | 4 | 2 | 2 | 8 | 3 | 75 | 69 | 54 | 61 | 2–3 | 2 |
31. | pJSC23 | DQ913645 | 2 | 2 | 12 | 4 | 10 | 2 | Cb | 55 | 73 | 41 | 67 | 1 | 1 |
32. | pJSC24 | DQ913646 | 2 | 1 | 12 | 2 | Cb | 2 | 1 | 48 | 27 | 42 | 32 | 1 | 1 |
33. | pJSC25 | DQ916743 | 149 | 127 | 104 | 21 | 109 | 64 | Cb | 239 | 194 | 195 | 256 | 1 | 1 |
B. For transcripts tagged with GATA repeat motif | Â | Â | |||||||||||||
1. | pJSC28 | EF050082 | 114 | 58 | 16 | 5 | Cb | 2 | 3 | 51 | 48 | 34 | 42 | 2–4 | 2–4 |
2. | pJSC30 | EF050084 | 169 | 20 | 65 | 48 | Cb | 1 | 1 | 168 | 128 | 113 | 137 | 1 | 1 |
3. | pJSC31 | EF051516 | 65 | 30 | 23 | 35 | Cb | 10 | 5 | 59 | 48 | 53 | 43 | 2 | 2 |
4. | pJSC32 | EF051517 | 326 | 33 | 28 | 52 | Cb | 8 | 3 | 1351 | 1261 | 1351 | 1261 | 1 | 1 |
5. | pJSC33 | EF051518 | 239 | 57 | 14 | 68 | 2 | 44 | Cb | 42 | 68 | 55 | 73 | 3–5 | 3–5 |
6. | pJSC34 | EF051519 | 490 | 78 | 19 | 14 | Cb | 37 | 3 | 589 | 510 | 465 | 610 | 2 | 2 |
7. | pJC87 | EF592582 | 386 | 39 | 14 | 9 | Cb | 2 | 3 | 314 | 296 | 357 | 260 | 1 | 1 |
8. | pJC88 | EF592583 | 134 | 87 | 93 | 102 | 4 | 15 | Cb | 201 | 174 | 124 | 145 | 1–2 | 1–2 |