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Table 3 GO terms that are over represented in one member of a species pair

From: Altered patterns of gene duplication and differential gene gain and loss in fungal pathogens

Species pair

Generic GO Slim Ontology (GO) Term

Species with over-represented GO terms

M. grisea/N. crassa

electron transport ‡

M. grisea

M. grisea/N. crassa

transport

 

M. grisea/N. crassa

generation of precursor metabolites and energy ‡

 

M. grisea/N. crassa

catalytic activity ‡

 

F. graminearum/T. reesei

transport

F. graminearum

F. graminearum/T. reesei

transporter activity

 

F. graminearum/T. reesei

electron transport ‡

 

F. graminearum/T. reesei

generation of precursor metabolites and energy ‡

 

F. graminearum/T. reesei

catalytic activity ‡

 

F. graminearum/T. reesei

cytoplasm

T. reesei

F. graminearum/T. reesei

lysosome

 

F. graminearum/T. reesei

Intracellular

 

F. graminearum/T. reesei

cellular component organization and biogenesis

 

F. graminearum/T. reesei

organelle

 

A. nidulans/S. nodorum

DNA Binding

A. nidulans

A. nidulans/S. nodorum

transcription regulator activity

 

A. nidulans/S. nodorum

transcription

 

A. nidulans/S. nodorum

regulation of biological process

 

A. nidulans/S. nodorum

nucleus

 

A. nidulans/S. nodorum

nucleobase nucleoside nucleotide and nucleic acid

 

A. nidulans/S. nodorum

metabolic process

 

A. nidulans/S. nodorum

nucleic acid binding

 

A. nidulans/S. nodorum

cytoplasm

 

A. nidulans/S. nodorum

intracellular

 

A. nidulans/S. nodorum

catalytic activity ‡

 

A. nidulans/S. nodorum

electron transport ‡

 

A. nidulans/S. nodorum

generation of precursor metabolites and energy ‡

 

A. nidulans/S. nodorum

organelle

 

A. nidulans/S. nodorum

peptidase activity

S. nodorum

A. nidulans/S. nodorum

catabolic process

 

A. nidulans/S. nodorum

antioxidant activity

 

A. nidulans/S. nodorum

extracellular region

 

P. chrysosporium/U. maydis

electron transport ‡

P. chrysosporium

P. chrysosporium/U. maydis

carbohydrate binding

 

P. chrysosporium/U. maydis

extracellular region

 

P. chrysosporium/U. maydis

response to abiotic stimulus

 

P. chrysosporium/U. maydis

generation of precursor metabolites and energy ‡

 

P. chrysosporium/U. maydis

nucleic acid binding

 

P. chrysosporium/U. maydis

nucleotide binding

 

P. chrysosporium/U. maydis

catalytic activity ‡

 

P. chrysosporium/U. maydis

protein complex

 

P. chrysosporium/U. maydis

peptidase activity

 

P. chrysosporium/U. maydis

multicellular organismal development

 

P. chrysosporium/U. maydis

amino acid and derivative metabolic process

 

P. chrysosporium/U. maydis

reproduction

 

P. chrysosporium/U. maydis

catabolic process

 
  1. ‡ Enrichment in pathogens and non-pathogens across four different pairwise comparisons