From: Systematic identification of stem-loop containing sequence families in bacterial genomes
 |  | Grouped by | Located within | |||
---|---|---|---|---|---|---|
Species | Clusters | sequence | strand | location | IS | rRNA |
B. anthracis | 4 | 3 | 2 | 2 | Â | Â |
B. halodurans | 6 | 6 | 4 | 3 | Â | 1 |
B. subtilis | 2 | 2 | 1 | 1 | Â | 1 |
C. perfringens | 6 | 2 | 1 | 1 | Â | Â |
C. tetani | 14 | 13 | 10 | 6 | 3 | Â |
E. faecalis | 7 | 5 | 3 | 3 | 1 | Â |
L. johnsonii | 3 | 3 | 2 | 2 | 1 | Â |
S. aureus | 11 | 7 | 5 | 4 | Â | Â |
S. pneumoniae | 28 | 22 | 13 | 9 | 6 | Â |
M. genitalium | 1 | 1 | 1 | 1 | Â | Â |
M. pneumoniae | 20 | 20 | 18 | 12 | Â | Â |
C. diphtheriae | 9 | 7 | 5 | 4 | 1 | Â |
M. leprae | 29 | 18 | 11 | 5 | Â | Â |
M. tuberculosis | 59 | 36 | 21 | 15 | 3 | Â |
B. melitensis | 11 | 7 | 5 | 4 | Â | Â |
R. conorii | 19 | 6 | 4 | 4 | Â | Â |
B. bronchiseptica | 26 | 8 | 5 | 4 | Â | Â |
B. parapertussis | 30 | 16 | 10 | 5 | 4 | Â |
B. pertussis | 52 | 28 | 16 | 4 | 3 | Â |
N. meningitidis | 44 | 9 | 7 | 6 | Â | Â |
E. coli | 12 | 8 | 6 | 6 | Â | 2 |
H. influenzae | 3 | 1 | 1 | 1 | Â | Â |
P. multocida | 1 | 1 | 1 | 1 | Â | Â |
P. aeruginosa | 9 | 5 | 4 | 4 | Â | Â |
P. putida | 75 | 35 | 26 | 14 | 4 | 2 |
S. typhi | 8 | 4 | 3 | 3 | Â | 2 |
S. typhimurium | 7 | 6 | 4 | 4 | Â | 1 |
V. cholerae | 7 | 7 | 5 | 4 | Â | 2 |
Y. pestis | 20 | 15 | 11 | 5 | 2 | Â |
Total | 523 | 301 | 205 | 137 | 28 | 11 |