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Table 2 Number of predicted RCRRs in four groups of secondary structure elements.

From: Analysis of the distribution of functionally relevant rare codons

LED ID

Group

 

1

2

3

4

abH01.02

2

2

5

-

abH08.14

1

-

-

1

abH12.01

1

1

-

1

abH15.02

-

3

1

2

abH19.01

-

1

3

-

abH34.02

2

1

2

-

  1. Groups: (1) completely located in a loop region, (2) mainly located in a loop region (more than 50% of the RCRR in a loop region), (3) mainly located in an α-helix or a β-strand (more than 50% of the RCRR in a α-helix or a β-strand), and (4) completely located in a secondary structure element. Families are referred by their internal database identifier (LED ID, see Table 1).
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BMC Genomics

ISSN: 1471-2164

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