Skip to main content

Table 1 Overview of H. akashiwo strains CCMP 452 and NIES 293 chloroplast genomes

From: Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains

 

CCMP 452

NIES 293

Length (bp)

160,149

159,370

   Small Single Copy

39,035

38,834

   Large Single Copy

77,470

77,206

   Inverted Repeat

21,822

21,665

G+C content (%)

30.5

30.4

Protein coding (%)

68.5

69.0

Avg. protein length

703

704

Protein coding genes

156

156

   With assigned function

130

130

   Conserved hypothetical (ycf)

19

19

   Hypothetical

7

7

Ribosomal RNA operons

2

2

Transfer RNA genes

34

34

Pseudo tRNA genes

1

1

tmRNA genes

1

1

  1. * This table reports total numbers of genes. Each of the two IRs contains 12 protein-coding genes, 7 genes for tRNAs and 1 rRNA operon.