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Table 1 Counts for human TFBS derived from repetitive DNA.

From: Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA

Category

Total count

Complete overlap

Partial overlap

All repeats

182

121

61

All SSR

103

59

44

All TEs

79

62

17

Alu

20

19

1

MIR

16

10

6

L1

10

4

6

All other LINEs

10

8

2

LTR

14

14

0

DNA

9

7

2

  1. The numbers of experimentally characterized TFBS mapped to different categories of human genome sequence are shown. Total counts are indicated along with counts for those cases where the TFBS completely or partially overlaps with the repeat.
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BMC Genomics

ISSN: 1471-2164

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