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Table 3 Polycistronic Zebrafish miRNAs.

From: Genomic Organization of Zebrafish microRNAs

Chromosome

Transcript Members

1

miR-16b, miR-15a-1

2

miR-23a-3, miR-27a

3

miR-365-2, miR-193a-1

4

miR-29a-1, miR-29b-3

4

Clustered miR-430 family: 57 members

4

miR-183, miR-96, miR-182*, miR-182

4

let-7b, let-7a-3

4

Clustered miR-430 family: 10 members

4

miR-133a*, miR-133a-1, miR-1-2

5

miR-130b, miR-454b-2

5

miR-301b, miR-130c-2

5

let-7a-4, miR-100-2

5

miR-144, miR-451

5

miR-34c, miR-34b

6

miR-141, miR-200c

6

miR-430c-1, miR-430a-11

6

miR-365-3, miR-193a-2

6

miR-365-4, miR-193a-3

7

miR-457a, miR-15b

8

miR-731-1, miR-462-1

8

miR-92a-1, miR-19b*, miR-19b, miR-20a, miR-19a*, miR-19a, miR-17a-1, miR-17a*

8

miR-181b-2, miR-181a-2

8

miR-731-2, miR-462-2

9

miR-15a-2, miR-16c

9

miR-221, miR-222

9

miR-92a-2, miR-17a-2

10

miR-23b, miR-27d

10

miR-310c, miR-130c

10

miR-194a, miR-192

10

miR-130a-1, miR-301a-1, miR-454a-1

10

miR-130a-2, miR-301a-2

10

let-7c-2, miR-99-2

11

let-7a-1, let-7f

14

miR-93, miR-19d, miR-25

14

miR-363, miR-19c, miR-20b, miR-18c

14

let-7c-1, miR-99-1

15

miR-16a, miR-15c

15

let-7a-2, miR-100-1

16

miR-30d, miR-30b

20

miR-214, miR-199*, miR-199-1

20

miR-133b, miR-133b*, miR-206-1

22

miR-217-1, miR-216a-1, miR-216b-1

22

miR-216b-2, miR-216a-2, miR-217-2

23

miR-29a-2, miR-29b-2

23

miR-200b, miR-200a, miR-429

Zv6_NA1101

miR-23a-2, miR-27c, miR-27c*

Zv6_scaffold3754

let-7e, let-7a-5

  1. The identity of individual miRNAs that reside within 3 kb of one another is shown along with chromosomal assignment. Predicted polycistronic transcripts were compared to known expression data to determine if the miRNAs had similar expression profiles.