Table 3 Comparison of polymorphism parameters between dinucleotide and trinucleotide EST-SSR located in untranslated region (UTR) or in translated region (TR)
SSR type | SSR in TR | SSR in UTR | Total | |
|---|---|---|---|---|
% of polymorphic loci | dinucleotide | 67 | 83 | 80 |
trinucleotide | 67 | 93 | 83 | |
indistincte | 67 | 86 | 82 | |
Number of allele per locus | dinucleotide | 5,3 | 7,9 | 7,3 |
trinucleotide | 3,6 | 4,4 | 4,1 | |
indistincte | 4 | 5,9 | 5,25 | |
Identification rate per locus | dinucleotide | 0,44 | 0,66 | 0,61 |
trinucleotide | 0,31 | 0,29 | 0,29 | |
indistincte | 0,34 | 0,44 | 0,41 |