Table 7 Observed number of SNPs in each functional/mutation category (SeattleSNP data)
CpG | Substitution | 5' UTR | 3' UTR | Rad | Cons | Syn | Introns |
|---|---|---|---|---|---|---|---|
nonCpG | C:G > A:T | 0 | 10 | 15 | 14 | 12 | 113 |
nonCpG | C:G > G:C | 0 | 7 | 17 | 16 | 9 | 143 |
nonCpG | C:G > T:A | 4 | 33 | 38 | 24 | 69 | 385 |
CpG | C:G > A:T | 0 | 0 | 2 | 1 | 12 | 6 |
CpG | C:G > G:C | 0 | 2 | 7 | 0 | 6 | 20 |
CpG | C:G > T:A | 3 | 23 | 44 | 23 | 123 | 292 |
nonCpG | A:T > C:G | 2 | 12 | 11 | 6 | 6 | 125 |
nonCpG | A:T > G:C | 2 | 42 | 35 | 26 | 69 | 539 |
nonCpG | A:T > T:A | 0 | 10 | 7 | 1 | 0 | 108 |
Total | Â | 11 | 139 | 176 | 111 | 306 | 1731 |