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Table 3 Overlapping of the different transcriptional responses with different selection criteria on datasets

From: Growth rate regulated genes and their wide involvement in the Lactococcus lactis stress responses

Compared conditions

Overlapping percentages

 

p-values < 0.05

ratios <1 or >1

 

ratios <1 or >1

ratios <0.8 or >1.2

ratios <0.67 or >1.5

p-values < 0.05

p-values < 0.03

p-values < 0.02

μ and CS

29%

29%

31%

29%

25%

21%

μ and IS

24%

23%

20%

24%

22%

22%

μ and SR

10%

9%

5%

10%

11%

9%

SR and μ

16%

15%

8%

16%

18%

14%

SR and CS

15%

15%

17%

15%

14%

11%

SR and IS

68%

70%

72%

68%

65%

59%

  1. Values in percentage represent the fraction of common genes compared to the whole growth rate response (for the three first lines) or the whole stringent response (for the three last lines). Abbreviations: SR = stringent response regulon, CS = carbon starvation response, IS = isoleucine starvation response, μ = growth rate response