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Table 1 GenMAPP pathways affected by a 1-h exposure of duodenal mucosa to L. plantarum WCFS1

From: Identification of the transcriptional response of human intestinal mucosa to Lactobacillus plantarum WCFS1 in vivo

GO Name

Changed

Measured

Total

caveola

3

4

4

Golgi stack

3

10

12

protein biosynthesis

20

173

252

peptidyl-prolyl cis-trans isomerase activity

6

26

32

protein metabolism

3

13

16

structural constituent of ribosome

18

153

232

isomerase activity

11

77

96

cytosolic large ribosomal subunit (sensu Eukarya)

7

38

39

cytoplasm

35

512

636

ribosome

13

117

167

heterogeneous nuclear ribonucleoprotein complex

4

16

17

translational initiation

3

18

26

endoplasmic reticulum

22

234

271

ER to Golgi transport

4

18

20

GTPase activity

3

21

38

regulation of translational initiation

4

25

32

fatty acid beta-oxidation

3

12

13

ubiquitin conjugating enzyme activity

7

46

75

chymotrypsin activity

10

79

119

catalytic activity

6

96

210

regulation of translation

3

24

27

metabolism

19

243

408

trypsin activity

10

79

134

cytosolic small ribosomal subunit (sensu Eukarya)

5

29

30

  1. Biological processes with relatively high numbers of gene reporters changed, based on the Gene Ontology (GO) database. The table shows the process title (GO name), the number of gene reporters changed changed (changed), measured with the microarrays (measured) and the total number of genes present in the pathway MAPP (total) (for detailed description of pathway selection, see Methods).