HUMAN SD | X-Chromosome | Y-Chromosome | Telomeres vs. rest of genome | Centromeres vs. rest of genome | Chromosome 19 | |||||
---|---|---|---|---|---|---|---|---|---|---|
 | vs. Autosomes | vs. Autosomes |  |  |  |  |  |  | ||
 | SDs in autosomes | SDs in the HSAX. | SDs in autosomes | SDs in the HSAY. | SDs outside Telomeres | SDs within Telomeres | SDs outside Centromeres | SDs within Centromeres | SDs outside HSA19 | SDs within HSA19 |
N | 1303 | 109 | 1303 | 51 | 1052 | 251 | 742 | 310 | 714 | 28 |
Divergence | 0.0238 | 0.0161 | 0.0238 | 0.0259 | 0.0233 | 0.026 | 0.0228 | 0.0247 | 0.0225 | 0.0285 |
P-value | Â | < 0.001 | Â | 0.087 | Â | < 0.001 | Â | < 0.001 | Â | 0.001 |
CHIMP SD | X-Chromosome | Y-Chromosome | Telomeres vs. rest of genome | Centromeres vs. rest of genome | Chromosome 19 | |||||
 | vs. Autosomes | vs. Autosomes |  |  |  |  |  |  | ||
 | SDs in autosomes | SDs in the HSAX. | SDs in autosomes | SDs in the HSAY. | SDs outside Telomeres | SDs within Telomeres | SDs outside Centromeres | SDs within Centromeres | SDs outside HSA19 | SDs within HSA19 |
N | 1415 | 110 | 1415 | 87 | 1224 | 191 | 789 | 435 | 779 | 10 |
Divergence | 0.0222 | 0.0156 | 0.0222 | 0.0223 | 0.0217 | 0.0252 | 0.021 | 0.0231 | 0.0207 | 0.038 |
P-value | Â | < 0.001 | Â | 0.891 | Â | < 0.001 | Â | < 0.001 | Â | < 0.001 |
HUMAN SD | Rearranged vs. | SDs within vs. | Â | Â | Â | Â | ||||
 | Colinear chromosomes | outside rearranged regions (excluding HSA2) |  |  |  |  | ||||
 | SDs in colinear chr. | SDs in Rearranged chr. | P-value | SDs Outside inversions | SDs inside inversions | P-value |  |  |  |  |
N | 267 | 447 | Â | 280 | 112 | Â | Â | Â | Â | Â |
Divergence | 0.0236 | 0.0219 | 0.01 | 0.0218 | 0.0219 | 0.934 | Â | Â | Â | Â |
CHIMP SD | Rearranged vs. | SDs within vs. | Â | Â | Â | Â | ||||
 | Colinear chromosomes | outside rearranged regions (excluding HSA2) |  |  |  |  | ||||
 | SDs in colinear chr. | SDs in Rearranged chr. | P-value | SDs Outside inversions | SDs inside inversions | P-value |  |  |  |  |
N | 256 | 523 | Â | 312 | 160 | Â | Â | Â | Â | Â |
Divergence | 0.0216 | 0.0203 | 0.025 | 0.0202 | 0.0199 | 0.693 | Â | Â | Â | Â |
HUMAN SD | Breakpoints vs. | Â | Â | Â | Â | Â | Â | Â | ||
 | inverted chromosomes |  |  |  |  |  |  |  | ||
 | (excludingHSA2) |  |  |  |  |  |  |  | ||
 | SDs in Rearranged chr. | SDs in BKPs | P-value |  |  |  |  |  |  |  |
N | 370 | 22 | Â | Â | Â | Â | Â | Â | Â | Â |
Divergence | 0.0217 | 0.0242 | 0.136 | Â | Â | Â | Â | Â | Â | Â |
CHIMP SD | Breakpoints vs. | Â | Â | Â | Â | Â | Â | Â | ||
 | inverted chromosomes |  |  |  |  |  |  |  | ||
 | (excludingHSA2) |  |  |  |  |  |  |  | ||
 | SDs in Rearranged chr. | SDs in BKPs | P-value |  |  |  |  |  |  |  |
N | 441 | 31 | Â | Â | Â | Â | Â | Â | Â | Â |
Divergence | 0.0201 | 0.0194 | 0.552 | Â | Â | Â | Â | Â | Â | Â |
HUMAN SD | SDs within vs. outside rearranged regions | Â | Â | Â | Â | Â | Â | Â | ||
 | (excluding breakpoints and HSA2) |  |  |  |  |  |  |  | ||
 | SDs Outside inversions | SDs inside inversions | P-value |  |  |  |  |  |  |  |
N | 264 | 106 | Â | Â | Â | Â | Â | Â | Â | Â |
Divergence | 0.0216 | 0.022 | 0.619 | Â | Â | Â | Â | Â | Â | Â |
CHIMP SD | SDs within vs. outside rearranged regions | Â | Â | Â | Â | Â | Â | Â | ||
 | (excluding breakpoints and HSA2) |  |  |  |  |  |  |  | ||
 | SDs Outside inversions | SDs inside inversions | P-value |  |  |  |  |  |  |  |
N | 291 | 150 | Â | Â | Â | Â | Â | Â | Â | Â |
Divergence | 0.0202 | 0.0199 | 0.583 | Â | Â | Â | Â | Â | Â | Â |
HUMAN SD | inversions (Newman et al. 2005) versus rest chromosomes | Â | Â | Â | Â | Â | Â | Â | ||
 | SDs Outside inversions | SDs inside inversions | P-value |  |  |  |  |  |  |  |
N | 670 | 44 | Â | Â | Â | Â | Â | Â | Â | Â |
Divergence | 0.0227 | 0.0196 | 0.015 | Â | Â | Â | Â | Â | Â | Â |
CHIMP SD | inversions (Newman et al. 2005) chromosomes | Â | Â | Â | Â | Â | Â | Â | ||
 | SDs Outside inversions | SDs inside inversions | P-value |  |  |  |  |  |  |  |
N | 713 | 66 | Â | Â | Â | Â | Â | Â | Â | Â |
Divergence | 0.021 | 0.0183 | 0.004 | Â | Â | Â | Â | Â | Â | Â |