Molecular architecture of the fruit fly's airway epithelial immune system
© Wagner et al; licensee BioMed Central Ltd. 2008
Received: 22 April 2008
Accepted: 29 September 2008
Published: 29 September 2008
Airway epithelial cells not only constitute a physical barrier, but also the first line of defence against airborne pathogens. At the same time, they are constantly exposed to reactive oxygen species. Therefore, airway epithelia cells have to possess a sophisticated innate immune system and a molecular armamentarium to detoxify reactive oxygen species. It has become apparent that deregulation of epithelial innate immunity is a major reason for the development of chronic inflammatory lung diseases. To elucidate the molecular architecture of the innate immune system of airway epithelial cells, we choose the fruit fly Drosophila melanogaster as a model, because it has the simplest type of airways, consisting of epithelial cells only. Elucidating the structure of the innate immune system of this "airway epithelial cell culture" might enable us to understand why deregulatory processes in innate immune signalling cascades lead to long lasting inflammatory events.
All airway epithelial cells of the fruit fly are able to launch an immune response. They contain only one functional signal transduction pathway that converges onto NF-κB factors, namely the IMD-pathway, which is homologous to the TNF-α receptor pathway. Although vital parts of the Toll-pathway are missing, dorsal and dif, the NF-κB factors dedicated to this signalling system, are present. Other pathways involved in immune regulation, such as the JNK- and the JAK/STAT-pathway, are completely functional in these cells. In addition, most peptidoglycan recognition proteins, representing the almost complete collection of pattern recognition receptors, are part of the epithelial cells equipment. Potential effector molecules are different antimicrobial peptides and lysozymes, but also transferrin that can inhibit bacterial growth through iron-depletion. Reactive oxygen species can be inactivated through the almost complete armamentarium of enzymatic antioxidants that has the fly to its disposal.
The innate immune system of the fly's airway epithelium has a very peculiar organization. A great variety of pattern recognition receptors as well as of potential effector molecules are conspicuous, whereas signalling presumably occurs through a single NF-κB activating pathway. This architecture will allow reacting if confronted with different bacterial or fungal elicitors by activation of a multitude of effectors.
Most animals possess an oxygen delivery system to fulfil the demands of their metabolically active organs. The architecture of respiratory organs is surprisingly similar throughout the animal kingdom, with branched tubules as repetitively used entities. Our own lung is made of a complex network of branching tubes that terminate in alveoli, where oxygen diffuses into the blood. In Drosophila larvae, the tracheal system consists of approximately 10.000 interconnected tubes. These very simple tubes are built from an epithelial monolayer that wraps around the central, gas-transporting lumen . Oxygen enters through two pairs of spiracular openings and passes through primary, secondary and terminal branches, reaching all tissues in the body. Although of much simpler organization, the fly's airway system shows striking similarities with our own lung regarding its architecture but also its physiology [2, 3]. The simplicity of its organization has made the Drosophila airway system to the most informative model for studying the genesis of tubular organs such as the lung or the kidney, and at the same time for complex processes such as angiogenesis [1, 4, 5].
One major characteristic of most, if not all epithelia, is the ability to launch an immune response if confronted with pathogens such as bacteria, fungi or viruses. This cell-autonomous response, where all parts of the innate immune system, comprising pattern recognition, signal transduction and effectuation, reside in the epithelial cells themselves. Even men depend on this evolutionary most ancient immune system in the fight against infections [6–8]. In addition, defects in the innate immune system of the epithelial cells may be one of the major causes underlying inflammatory diseases of barrier epithelia such as Crohn's disease or chronic asthma [9, 10]. A detailed analysis of the inventory of immune-competent epithelial cells has always been obstructed by the complexity of the epithelia of interest. Usually, a number of different cells constitute the epithelia. In addition, infection and a primary immune response of the epithelial cells recruit the entire armamentarium of leucocytes to the site of infection. Amongst all immune competent epithelial organs, the insect airway epithelium is presumably the simplest one. It comprises only one type of epithelial cells, organized in an epithelial monolayer, thus representing a "cell culture" in the intact animal [4, 11].
Drosophila has served over decades as a tremendously useful model to study basic mechanisms in almost every area of modern biomedical research. This holds also true for innate immunity that has experienced a revival following pioneering work in Drosophila [12, 13]. Numerous studies performed in this field gave us a comprehensive picture of the fly's immune response towards invading microorganisms. In contrast, our knowledge about the epithelial immunity is only fragmentary so far. We know that various epithelia respond to pathogen encounter with the expression of antimicrobial peptide genes . In addition, the IMD-, but not the Toll-pathway is of central importance for this reaction .
To improve the prospects of this surprisingly simple model epithelium that has been and will be used in numerous research areas, we performed an extensive transcriptome study with the aim to better understand different lung diseases such as asthma, COPD or acute lung injury . Therefore, we have focuses on three areas, innate immunity, response to reactive oxygen species and signalling.
Immuno-transcriptome of the airway epithelium of the fruit fly
To uncover the architecture of the tracheal epithelial cell's immune system, we looked at the presence of all known constituents of the fruit fly's innate immune system. Manual isolation of trachea from third instar larvae was performed prior to RNA isolation. The material was thoroughly purified from attached, non-tracheal material. It was checked for contamination with fat body or hemocyte material by RT-PCR with primers derived from genes exclusively expressed in either of these tissues (P6 and hemese respectively). Only if these controls revealed negative results, the material was used for downstream experiments. We looked at the pattern recognition receptors, the molecules that constitute different signalling pathways involved in innate immune responses as well as at relevant transcription factors.
Pattern recognition receptors
Regarding the second, major signaling pathway, the IMD-pathway, a different scenario emerged. All members required for proper function of this pathway are expressed in the airway epithelia. Starting with the mentioned above PGRPs, IMD itself, TAK1, FADD, Dredd, Kenny, Ird5 and relish are present. This confirms that the IMD-pathway is functional in the airway epithelium meaning that bacterial patterns can be recognized and this information transformed into a suited physiological response (Fig. 3B, E).
The JNK pathway is relevant for the control of immune responses in the fly. Its exact role for the activation of a proper immune response is still matter of debate. Apparently, it is a discrete pathway  that may have an inhibitory effect on the IMD pathway . Key components of this pathway including Tak1, hemipterous, basket, d-Jun and dFos, are expressed in the airway epithelium, indicating that this pathway is also functional (Fig. 3C, E). The fourth pathway associated with immune responses, the JAK/STAT pathway, consists of only a very limited number of elements. The ligand upd (one of the 3 cytokines upd, upd2 and upd3) binds to the receptor domeless, which activates the Janus kinase hopscotch (hop) and finally the STAT transcription factor. All members of this pathway are present in the larval airway epithelia (Fig. 3D). These results are summarized schematically in Figure 3. In addition, STAT-dependent transcription can be visualized using transgenic flies, where gfp-expression is under the control of STAT-responsive elements . Larvae of these flies show a pronounced gfp-expression in the tracheal endings, the spiracles up to early L3 stages (Fig. 3F).
Transcription factors of the immune system
All three functional signaling pathways are part of the airways epithelial immune system
Transcriptome of the airway epithelium
Genes specifically expressed in the airway epithelium.
Ø log2 ratio
Ecdysis triggering hormone
Imaginal disc growth factor 4
Ecdysone-dependent gene 91
RNA polymerase II 15 kD subunit
Serine protease inhibitor 3
Glutamine synthetase 2
Suppressor of variegation 205
mitochondrial ribosomal protein L51
lethal (3) 01239
Ribosomal protein S6
lethal (2) k05819
mitochondrial single stranded DNA-binding protein
Odorant-binding protein 56a
Developmental embryonic B
Signal recognition particle protein 19
Dodeca-satellite-binding protein 1
Ribosomal protein S19a
forkhead domain 96Ca
Ribosomal protein S12
mitochondrial ribosomal protein L13
Odorant-binding protein 8a
Histone H4 replacement
Ribosomal protein L23A
Ribosomal protein S24
lethal (2) k03203
mitochondrial ribosomal protein S21
Airway epithelia are characterized by common architectures throughout the animal kingdom. Efficient gas exchange requires maximized surface areas and minimized epithelial thickness. These features are directly opposed to the needs of an immune response that favors minimization of surface areas and robust design of the epithelia. This conflict of interest has to be attenuated by very effective immune responses inhibiting bacterial colonization and growth rapidly and effectively.
The repertoire of these epithelial cells with immune related proteins defines their potential defense response. Infection with different bacteria can obviously induce a pronounced immune response in the airway epithelia of the fly. Apparently, this reaction relies on the IMD-pathway, a feature that is presumably common to all epithelial tissues [14, 15]. The molecular rationale behind this focus on the IMD-pathway might be very simple; all vital members of the IMD-pathway are present in the airway epithelial cells. This allows a cell-autonomous activation of this pathway, finally leading to expression of antimicrobial peptide genes. In contrast, the other immune-relevant pathway leading to activation of NF-κB factors, the Toll-pathway is not complete in the airway epithelial cells. Some vital members of this pathway are simply not present in these cells, obviously obstructing activation of the entire pathway. Present are the receptor Toll, the ligand spätzle, the adaptor MyD88 and the complex of both NF-κB factors dorsal and dif as well as their repressor cactus. Especially the presence of the entire NF-κB complex may ensure that dorsal or dif are not activated. Setting the Toll-pathway aside in epithelial immunity might be a reasonable if not an essential strategy. Epithelial responses are first and foremost local responses to prevent the epithelium from unwanted immune reactions. The Toll-pathway is on principle an organ systemic signaling system, because the recognition steps occur within the extracellular space and if the recognition cascade is activated, all responsive cells having contact with this extracellular space are activated. In case of the airway epithelium this would mean a reaction of all airway epithelial cells if the Toll-pathway is activated locally in this structure. Expression of the drosomycin gene, which is known to be a classical Toll-pathway dependent gene, is hard to understand, but this seemingly paradoxical situation has been reported earlier . Regarding the pattern recognition receptors, a great variety of PGRPs (peptidoglycan recognition receptors) and GNBPs (gram negative binding proteins) are present in this tissue. Especially all membrane bound PGRPs are present, presumably allowing sensing a great variety of different pathogen associated molecular patterns (PAMPs). Although this tissue expresses this wealth of pattern recognition receptors, the response should be relatively stereotype, simply because all these receptors converge onto a single signal transduction pathway, namely the IMD-pathway. Nevertheless, two other immune-relevant pathways that reside in the epithelial cells, the JNK- and the JAK/STAT-pathways, may shape the response towards an encounter with pathogens. Both pathways are present in these cells, suggesting that they are functional. Regarding the terminal parts of the signal transduction pathways, we observed an unexpected complexity. All three NF-κB factors, relish, dorsal and dif are present in this tissue. This is insofar puzzling as it is generally agreed that dorsal and dif are devoted to the Toll-pathway, which is not functional in the airways. In addition, 3 members of the GATA-family of transcription factors are also present in the airways, presumably playing an important role in the control of immunity, as it has been shown for other tissues . The basal expression of a number of antimicrobial peptide genes as well as of lysozymes indicates that this armament against microbes can be used in the airway epithelium. Another, complementary part of the immune response may be seen in the constitutively high expression of the transferrin1 gene. It is at position 2 of the genes with highest specificity for the airway epithelium (table 1). In the mammalian airway epithelium, transferrin is known to play an important role not only in the capture of Fe2+-ions, but even more importantly, it deprives the airway liquid from Fe2+, thus inhibiting bacterial growth .
Very impressive is the unforeseen complexity of antioxidative enzymes serving the airway epithelial cells. As this structure is directly exposed to high oxygen pressure and environmentally produced reactive oxygen species (ROS), it simply might be imperative using the almost complete antioxidative armament to protect this very delicate structure. Alternatively, ROS production by e.g. the DUOX may be a strategy to fight against pathogenic bacteria entering the airways, thus urging to protect the own cells against these endogenous ROS production. ROS species that might be generated by diverse sources such as pollen are believed to represent major mediators of inflammatory responses in the airway epithelium . Impairments of central antioxidative enzymes such as SODs are therefore of central importance for the development of long lasting airway inflammatory responses .
Signaling in the airway epithelium is not yet understood at all. It is known that adrenergic signaling has an important impact on the development of asthma, with the epithelial cell being in a central position. Nevertheless, we have no idea, what is regulated in the airway epithelial cells in response to this stimulus . In insects, octopamine, the invertebrate adrenaline, increases cAMP in the trachea , similar as in the vertebrate system, but so far, the physiological relevance of this hormonal modulation in not understood.
Airway epithelial cells have to cope with a multitude of problems. They come into contact with an unpredictable diversity of airborne bacterial and fungal spores. Presumably to deal with this problem, the innate immune system of the fly's airway epithelial cell has a very peculiar architecture. The almost complete set of pattern recognition receptors, especially the membrane bound ones, should enable to detect the vast majority of these airborne pathogens. They converge onto only one NF-κB activating signalling cascade, the IMD-Pathway. Omitting the second signalling cascade that converges onto NF-κB factors, the Toll-pathway, may be a necessity of epithelial immune systems to restrict the response locally. Shaping of the immune response may occur through additional signalling systems such as the JNK- and the JAK/STAT-pathway. Epithelial cells obviously contain the almost complete set of enzymatic antioxidants, including both SODs, 4 out of 5 peroxiredoxins, the catalase and various glutathione-S-transferases, presumably to cope with exogenously generated reactive oxygen species. The great potency of airway epithelial cells to fight pathogens and to cope with reactive oxygen species and the willingness to launch the corresponding responses may represent a major reason why these structures are prone to various inflammatory diseases such as asthma or COPD (chronic obstructive pulmonary disease).
Trachea of early third instar larvae were prepared manually in ice-cold PBS. Subsequently, purified trachea were transferred to the denaturation solution of the RNA isolation kit and immediately homogenized. RNA isolation was performed with the RNA NucleoSpin kit (Macherey-Nagel, Dueren, Germany). CapFinder cDNA-synthesis was performed as described earlier . Amplification of the cDNA was performed for 28 cycles taking advantage of a long and accurate PCR system. The integrity and quality of the amplificate was checked by gel electrophoresis. This material was used for RT-PCR experiments, qRT-PCR experiments and the production of labeled hybridization probes for DNA-microarray analysis. cDNA was used for downstream applications only if RT-PCR with primers for hemese (hemocytes) and P6 (fat body) didn't gave any signal. RT-PCR was performed with corresponding primer pairs for every gene under investigation (see supplementary information). The amplification was performed for 30 cycles using a conventional PCR-approach. Positive (fat body and hemocytes as template) as well as negative controls (no cDNA-synthesis) were always included. Semiquantitative RT-PCR was performed with trachea isolated from control animals and those infected with Pseudomonas aeruginosa. Infection was essentially performed as described . RT-PCR was performed for 30 cycles with identical amounts of cDNA using the house keeping gene rpl 32 as control. Other infection experiments were perfomed with the insect pathogen Erwinia carotovora as described . Quantitative RT-PCR was performed with a Lightcycler (Roche Diagnostics, Ingelheim, Germany) using the kit TAQurate™ Green Real-time PCR master mix (Epicentre Technologies, Biozym, Hess. Oldendorf, Germany). Probe sets were normalized against the housekeeping gene rpl 32. At least three independent experiments were used.
For microarray analysis, equal amounts of amplified and purified cDNA were subjected to T7-based cRNA synthesis. The synthesis was performed with the T7 MEGAscript kit (Ambion, Applera, Darmstadt, Germany) and supplemented aaUTPs (Ambion) for the labeling of the cRNA. Following purification (RNA NucleoSpin kit, Macherey-Nagel, Düren, Germany) and subsequent precipitation of the cRNA, approximately 10 μg of aminoallyl modified-cRNA was coupled to succinimidyl modified-Cy3 und -Cy5 dyes (Amersham) in the presence of 50% DMSO and 0.05 M NaHCO3 (pH:9.0). Coupling reaction was carried out for two hours in the dark followed by purification and precipitation of the labeled cRNA. After assessment of the labeled cRNA approximately 2–3 μg (or 150 pmol) of Cy3 and Cy5 labeled probe were used for hybridization. Hybridisation was carried out at 42°C overnight. After hybridization slides were washed twice with 1 × SSC, 0.1% Triton-X-100 at 60°C for 15 minutes and with 0.1 × SSC, 0.1% Triton-X-100 at 37°C for 15 min. Subsequently they were washed with 0.1 × SSC for 30 seconds at room temperature and rinsed with water before dried.
Gene expression analysis was performed by using the Drosophila OLIGO 14k_version1 gene chip (Canadian Drosophila Microarray Center, University of Toronto, Canada). The slides were scanned by using the GenePix™ 4000B scanner (Axon Instruments, Molecular Devices, München, Germany). For spot finding and generating preliminary result files the raw scanned image files were analyzed using GenePixPro version 6.0 whereas data normalization, quality assurance and control, filtering and clustering were carried out with GeneTraffic (Iobion, Agilent, Waldbronn, Germany) and statistical analysis with the SAM-program package. In search of functional composition of genes significantly affected upon infection and ectopic expression we used the bioinformatics web tool FatiGO .
The DNA-microarray experiments have been deposited in the GEO-database.
Drosophila larvae were fixed simultaneously with 1.5% glutaraldehyde and 2% osmium tetroxide in 0.1 M sodium cacodylate buffer for 90 minutes on ice . After rinsing with 0.1 M sodium cacodylate buffer, samples were post-fixed with 1% osmium tetroxide in 0.1 M sodium cacodylate buffer for 2 hours, rinsed in the same buffer (4 × 5 min), washed in distilled water (2 × 5 min), and stained en bloc in half-saturated uranyl acetate over night. After rinsing with distilled water (4 × 5 min), samples were dehydrated through an ascending series of actone (70%, 90%, 100% two times for 10 min each), transfered into a 1:1-mixture of acetone and Araldite for one hour, and finally into pure Araldite over night. After transfer into fresh resin, samples were polymerised at +60°C for three days. Ultrathin sections were cut on an Ultracut E (Reichart-Jung, Wien, Austria), collected on formvar coated nickel grids, stained with lead citrate, and analysed using a Zeiss EM 900 (Zeiss, Oberkochen, Germany).
We would like to thank Bruno Lemaitre, Jean-Luc Imler and Norbert Perrimon for material, Roswitha Naumann (Marburg) for technical assistance. This work is part of the Transregio 22 program of the "Deutsche Forschungsgemeinschaft" (TPA7). In addition, it was supported by the "Claussen-Simon-Stiftung" and the "Stifterverband der deutschen Wirtschaft".
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