Table 1 Genes upregulated by TSA treatment in F9 cells (representative genes from total of 226 genes at 2-fold level of expression)
From: Histone deacetylase inhibitors: A new mode for inhibition of cholesterol metabolism
Treatment type | EtOH | TSA | Â | Â | |||
|---|---|---|---|---|---|---|---|
Systematic | FC | Norm | SE | Norm | SE | Gene | GB Acc |
93714_f_at | 14.5 | 1.64 | 1.0 | 23.82 | 3.1 | H2-L | AI117211 |
100127_at | 18.0 | 1.08 | 0.2 | 19.37 | 3.4 | CRABP2 | M35523 |
92770_at | 18.3 | 0.83 | 0.2 | 15.28 | 2.0 | S100A6 | X66449 |
95471_at | 23.2 | 0.75 | 0.3 | 17.30 | 2.4 | CDKN1C | U22399 |
93981_at | 12.8 | 1.07 | 0.3 | 13.72 | 3.0 | PLAT | J03520 |
92275_at | 10.2 | 1.00 | 0.3 | 10.16 | 0.5 | TCFAP2C | X94694 |
92502_at | 7.6 | 1.00 | 0.1 | 7.60 | 0.8 | ZAC1 | X95504 |
100139_at | 6.6 | 0.92 | 0.3 | 6.11 | 0.7 | PCSK1N | AI841733 |
98758_at | 6.0 | 0.82 | 0.2 | 4.92 | 0.4 | ALOX15 | L34570 |
160547_s_at | 5.7 | 0.98 | 0.1 | 5.60 | 0.7 | TXNIP | AI839138 |
94545_at | 5.5 | 1.02 | 0.2 | 5.60 | 0.1 | RTN1 | AW123115 |
99906_at | 4.8 | 0.93 | 0.2 | 4.48 | 0.4 | ESX1 | AF085715 |
93875_at | 4.7 | 1.03 | 0.2 | 4.84 | 0.9 | HSP70-3 | M12571 |
161482_f_at | 4.7 | 1.21 | 0.2 | 5.65 | 1.1 | PRPH1 | AV068234 |
104716_at | 3.8 | 0.99 | 0.2 | 3.82 | 0.1 | RBP1 | X60367 |
99642_i_at | 3.6 | 0.94 | 0.2 | 3.40 | 0.2 | CPE | X61232 |
94881_at | 3.3 | 0.77 | 0.3 | 2.59 | 0.1 | CDKN1A | AW048937 |
99643_f_at | 3.2 | 0.99 | 0.1 | 3.16 | 0.3 | CPE | X61232 |
98067_at | 3.2 | 0.77 | 0.2 | 2.43 | 0.1 | CDKN1A | U09507 |
92501_s_at | 3.0 | 1.01 | 0.2 | 3.04 | 0.5 | ZAC1 | X95503 |
93120_f_at | 2.9 | 1.04 | 0.1 | 3.01 | 0.3 | H2-K; H-2K | V00746 |
97487_at | 2.8 | 0.94 | 0.1 | 2.60 | 0.2 | SERPINE2 | X70296 |
96704_at | 2.6 | 0.95 | 0.1 | 2.52 | 0.4 | SFN | AF058798 |
93888_at | 2.5 | 0.84 | 0.2 | 2.10 | 0.1 | HOXB1; HOX-2.9 | X53063 |
95297_at | 2.3 | 1.06 | 0.3 | 2.48 | 0.3 | HOXA1 | M22115 |
93278_at | 2.1 | 1.03 | 0.2 | 2.21 | 0.6 | SCP2 | M91458 |
104580_at | 2.1 | 0.79 | 0.2 | 1.67 | 0.1 | PLCD | U85711 |