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Table 4 HapMap SNPs using CEU HapMap Samples

From: Establishing an adjusted p-value threshold to control the family-wide type 1 error in genome wide association studies

 

CEPH Utah HapMap Samples

Chromosome

Total number of SNPs

Total number of blocks

Total number Interblock SNPS

Total number of blocks + Interblock SNPs

1

184403

10740

1815

12555

2

211913

11219

1510

12729

3

166801

9431

1426

10857

4

155953

10204

1745

10363

5

161666

8725

1238

9963

6

174458

8677

1743

10420

7

137148

8050

1140

9190

8

141925

7707

1076

8783

9

116824

7092

1105

8197

10

132087

7428

1250

8607

11

124354

6821

1037

7858

12

118973

6959

991

7950

13

99669

5290

793

6083

14

80500

4690

893

5583

15

69104

4690

814

5504

16

68205

5212

817

6029

17

56026

4127

715

4842

18

73392

4486

742

5228

19

35412

3109

570

3679

20

60421

3896

606

4502

21

32740

2141

380

2521

22

33369

2491

421

2853

Total

2,435,343

143,185

22,827

164,296